RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 LMF2Q9BU23 707 aaKnown RBP5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 HES7Q9BYE0 225 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 C3orf14Q9HBI5 128 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 SLC52A3Q9NQ40 469 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 SERHLQ9NQF3 203 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 ZCCHC3Q9NUD5 404 aaKnown RBP5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 GPATCH2Q9NW75 528 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 HPF1Q9NWY4 346 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 ANKRD10Q9NXR5 420 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 LUZP4Q9P127 313 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 KLHL14Q9P2G3 628 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 MAP10Q9P2G4 905 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 BTNL2Q9UIR0 455 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 NTNG1Q9Y2I2 539 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 NPFFR2Q9Y5X5 522 aa5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 CHCHD2Q9Y6H1 151 aaPredicted RBP5.22□□□□□ -1.57
RPUSD4-204ENST00000530036 GTF3C1Q12789 2109 aa5.21□□□□□ -1.57
RPUSD4-204ENST00000530036 USP9XQ93008 2570 aaPredicted RBP5.21□□□□□ -1.57
RPUSD4-204ENST00000530036 PCNX3Q9H6A9 2034 aa5.21□□□□□ -1.57
RPUSD4-204ENST00000530036 LRRK2Q5S007 2527 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 A0A0G2JMM0 328 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 RNF103-CHMP3A0A140T963 221 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 A0A1W2PPB8 328 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 A0A1W2PRS3 328 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 OR6C70A6NIJ9 312 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 KIR3DP1A8MWS1 328 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 CAPN14A8MX76 684 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 TSPAN2O60636 221 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SHOX2O60902 331 aaPredicted RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 ABCB7O75027 752 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 PPM1BO75688 479 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 FAM107AO95990 144 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 HMGN2P05204 90 aaKnown RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SP1P08047 785 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 ABCB1P08183 1280 aaPredicted RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 CCL3P10147 92 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 ACP2P11117 423 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 HOXB9P17482 250 aaPredicted RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 CAPN3P20807 821 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 CCT3P49368 545 aaKnown RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 MAN2A2P49641 1150 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 ARFIP2P53365 341 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 FBXW4P57775 412 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SRSF1Q07955 248 aaKnown RBP eCLIP5.21□□□□□ -1.587e-6■□□□□ 10.7
RPUSD4-204ENST00000530036 PLCXD2Q0VAA5 305 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 TP53BP2Q13625 1128 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 MAPKAPK3Q16644 382 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 VPS26BQ4G0F5 336 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 CYP27C1Q4G0S4 372 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 TIGD2Q4W5G0 525 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 PRR30Q53SZ7 412 aaPredicted RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 COLEC12Q5KU26 742 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SAXO2Q658L1 398 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SPINK14Q6IE38 97 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SLC25A25Q6KCM7 469 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 CDC73Q6P1J9 531 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 BLOC1S3Q6QNY0 202 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 IL20RBQ6UXL0 311 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 RTL4Q6ZR62 310 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 GALNTL5Q7Z4T8 443 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 PRR22Q8IZ63 422 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 FBXW8Q8N3Y1 598 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 CPSF7Q8N684 471 aaKnown RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 ANKS4BQ8N8V4 417 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 ZFP62Q8NB50 900 aaPredicted RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SLC16A11Q8NCK7 471 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 VPS37AQ8NEZ2 397 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 NUP43Q8NFH3 380 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 OR10G3Q8NGC4 313 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 OR4N2Q8NGD1 307 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 OR4A15Q8NGL6 344 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 MIPOL1Q8TD10 442 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 HGDQ93099 445 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 TMEM125Q96AQ2 219 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 OMA1Q96E52 524 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 MAGED4Q96JG8 741 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 RILPQ96NA2 401 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 FRMD6Q96NE9 622 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 OR52E6Q96RD3 313 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 TAAR6Q96RI8 345 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SECISBP2Q96T21 854 aaKnown RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 STACQ99469 402 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 ACTRT3Q9BYD9 372 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SERHL2Q9H4I8 314 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 PROK2Q9HC23 129 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 Q9N2J8 555 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 TIMMDC1Q9NPL8 285 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 EQTNQ9NQ60 294 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 KLHL1Q9NR64 748 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 DUSP22Q9NRW4 184 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SLC6A13Q9NSD5 602 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 DEPPQ9NTK1 212 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 GIN1Q9NXP7 522 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 CNOT11Q9UKZ1 510 aaKnown RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 TRIM33Q9UPN9 1127 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 KLF13Q9Y2Y9 288 aaPredicted RBP5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 SNX8Q9Y5X2 465 aa5.21□□□□□ -1.58
RPUSD4-204ENST00000530036 ESPL1Q14674 2120 aa5.2□□□□□ -1.58
RPUSD4-204ENST00000530036 HEATR5AQ86XA9 2040 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms