RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 ALS2CR12Q96Q35 445 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 CHP1Q99653 195 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 TBL1YQ9BQ87 522 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 APOL2Q9BQE5 337 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 NPFFR1Q9GZQ6 430 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 CHRNA10Q9GZZ6 450 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 KLHL31Q9H511 634 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 FAM96AQ9H5X1 160 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 XKR8Q9H6D3 395 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 OR6C2Q9NZP2 312 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 HSPB7Q9UBY9 170 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ASF1AQ9Y294 204 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ALG6Q9Y672 507 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 DNHD1Q96M86 4753 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 CSMD1Q96PZ7 3565 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 A0A096LPK6 155 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 H7C0S8 307 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 TNFRSF13BO14836 293 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 LIN7AO14910 233 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 KCNN4O15554 427 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ERAL1O75616 437 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 PGM3O95394 542 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 AP2A1O95782 977 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 CRYABP02511 175 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 FTH1P02794 183 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ITGA3P26006 1051 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 PDHA2P29803 388 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 CETN2P41208 172 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 NSG1P42857 185 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 HADHBP55084 474 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 PLOD1Q02809 727 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 CACNG1Q06432 222 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 AIMP2Q13155 320 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 RUNX2Q13950 521 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 KIR2DS3Q14952 304 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 MED22Q15528 200 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 SLC5A12Q1EHB4 618 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 DEFB110Q30KQ9 67 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 NKAIN1Q4KMZ8 207 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ZNF658BQ4V348 819 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ANKRD20A2Q5SQ80 823 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ANKRD20A1Q5TYW2 823 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ANKRD20A3Q5VUR7 823 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 DCAF12L2Q5VW00 463 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 LRRC8EQ6NSJ5 796 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 C11orf63Q6NUN7 778 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 CDC73Q6P1J9 531 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 TMEM81Q6P7N7 255 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 Q6ZS92 163 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 CUZD1Q86UP6 607 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 TBC1D21Q8IYX1 336 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ST6GALNAC3Q8NDV1 305 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 OR5AR1Q8NGP9 310 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 GABPB2Q8TAK5 448 aaPredicted RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 PPP4R1Q8TF05 950 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 ELMO1Q92556 727 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 TMEM18Q96B42 140 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 URB1-AS1Q96HZ7 61 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 DNAJC1Q96KC8 554 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 KLHL15Q96M94 604 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 SPATA13Q96N96 652 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 OR2A14Q96R47 310 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 FAM60AQ9NP50 221 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 SMARCAL1Q9NZC9 954 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 DHCR7Q9UBM7 475 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 FBXL4Q9UKA2 621 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 PLCL2Q9UPR0 1127 aa4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 TDRKHQ9Y2W6 561 aaKnown RBP4.77□□□□□ -1.65
AMBRA1-209ENST00000529963 PIKFYVEQ9Y2I7 2098 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 CNTRLQ7Z7A1 2325 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 PDZD2O15018 2839 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 DIDO1Q9BTC0 2240 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 TRBV5-4A0A0C4DH59 114 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 A0A1B0GX78 115 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 HEATR9A2RTY3 570 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 AKR1B15C9JRZ8 316 aaPredicted RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 H3BMH7 237 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 CCL22O00626 93 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 HNRNPCL1O60812 293 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 EIF2S1P05198 315 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 UMODP07911 640 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 ITGAXP20702 1163 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 PTMSP20962 102 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 MMP11P24347 488 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 TTKP33981 857 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 CPOXP36551 454 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 MAGEA1P43355 309 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 TSFMP43897 325 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 GABRA4P48169 554 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 MARCKSL1P49006 195 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 EIF3EP60228 445 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 OLR1P78380 273 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 PRAMEP78395 509 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 OTUD4Q01804 1114 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 MSLNQ13421 630 aaPredicted RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 OLIG2Q13516 323 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 ITIH4Q14624 930 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 ZIC1Q15915 447 aa4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 DNAJC21Q5F1R6 531 aaKnown RBP4.76□□□□□ -1.65
AMBRA1-209ENST00000529963 AGAP7PQ5VUJ5 663 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms