RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PCDH17O14917 1159 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 CDK6Q00534 326 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 CYP2R1Q6VVX0 501 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 HSDL2Q6YN16 418 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 C11orf65Q8NCR3 313 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 NACC2Q96BF6 587 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 ASB9Q96DX5 294 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 VMP1Q96GC9 406 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 WWTR1Q9GZV5 400 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 NXF5Q9H1B4 397 aaKnown RBP22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 FBXO34Q9NWN3 711 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 SUCOQ9UBS9 1254 aaKnown RBP22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 GPR55Q9Y2T6 319 aaPredicted RBP22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 DUXAA6NLW8 204 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 NKX2-8O15522 239 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 ADRB1P08588 477 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 ARAFP10398 606 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 Q0VFX4 171 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 SCARB2Q14108 478 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 SPATS1Q496A3 300 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 RPS26P11Q5JNZ5 115 aaPredicted RBP22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 PTRH1Q86Y79 214 aaKnown RBP22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 TMEM19Q96HH6 336 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 RUBCNLQ9H714 662 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 DUSP22Q9NRW4 184 aa22.9■■□□□ 1.26
LDLRAD3-203ENST00000528989 TMEM200CA6NKL6 621 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 ASNA1O43681 348 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 GCM2O75603 506 aaPredicted RBP22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 NKX2-2O95096 273 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 GGT1P19440 569 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 CLCN2P51788 898 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 ZNHIT3Q15649 155 aaPredicted RBP22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 FXNQ16595 210 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 PLAG1Q6DJT9 500 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 GLYATQ6IB77 296 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 HIPK4Q8NE63 616 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 ELP5Q8TE02 316 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 STACQ99469 402 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 A4GALTQ9NPC4 353 aa22.89■■□□□ 1.25
LDLRAD3-203ENST00000528989 ARPC2O15144 300 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 GSTA4O15217 222 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 SLC28A2O43868 658 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 FCMRO60667 390 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 ZIC2O95409 532 aaPredicted RBP22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 CHRM4P08173 479 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 NR2F1P10589 423 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 C1orf146Q5VVC0 180 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 FIGNL1Q6PIW4 674 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 SLC29A4Q7RTT9 530 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 SPPL2CQ8IUH8 684 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 COX18Q8N8Q8 333 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 RMND5BQ96G75 393 aaPredicted RBP22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 BTBD9Q96Q07 612 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 SPATA9Q9BWV2 254 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 P2RX2Q9UBL9 471 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 CFL2Q9Y281 166 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 CXCR6O00574 342 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 PPICP45877 212 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 RFX3P48380 749 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 NR0B1P51843 470 aaKnown RBP22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 GPAT3Q53EU6 434 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 HEPHL1Q6MZM0 1159 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 C16orf62Q7Z3J2 963 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 HMGN2P46Q86SG4 172 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 RAB43Q86YS6 212 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 DENND2DQ9H6A0 471 aaPredicted RBP22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 GIN1Q9NXP7 522 aa22.88■■□□□ 1.25
LDLRAD3-203ENST00000528989 OR6C76A6NM76 312 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 EFSO43281 561 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 H6PDO95479 791 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 PRKAR1AP10644 381 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 ATP6V1B2P21281 511 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 HOXD11P31277 338 aaPredicted RBP22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 PCGF2P35227 344 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 MAGEA8P43361 318 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 ST13P50502 369 aaKnown RBP22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 ANXA11P50995 505 aaKnown RBP22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 BNIP2Q12982 314 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 KPNB1Q14974 876 aaKnown RBP22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 EXT1Q16394 746 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 ZNF630Q2M218 657 aaPredicted RBP22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 ATAD3BQ5T9A4 648 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 ERICH5Q6P6B1 374 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 DHFR2Q86XF0 187 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 ZG16BQ96DA0 208 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 TREX2Q9BQ50 279 aaPredicted RBP22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 THUMPD1Q9NXG2 353 aaKnown RBP22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 OR10H1Q9Y4A9 318 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 SNX13Q9Y5W8 968 aa22.87■■□□□ 1.25
LDLRAD3-203ENST00000528989 NCOR2Q9Y618 2525 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 KLK10O43240 276 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 ZNF354AO60765 605 aaPredicted RBP22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 KCNK2O95069 426 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 HPP00738 406 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 IGKV1D-16P01601 117 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 CRYBA2P53672 197 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 RBBP4Q09028 425 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 FLOT2Q14254 428 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 DCST2Q5T1A1 773 aa22.86■■□□□ 1.25
LDLRAD3-203ENST00000528989 HLA-DQA1Q5Y7H0 255 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms