RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 MTFR2Q6P444 385 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 PAOXQ6QHF9 649 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 FAM57AQ8TBR7 257 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 RNF138Q8WVD3 245 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 TMBIM1Q969X1 311 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 CCDC120Q96HB5 630 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 TMEM41AQ96HV5 264 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 RILPQ96NA2 401 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 NODALQ96S42 347 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 PAIP2Q9BPZ3 127 aaKnown RBP15.9■□□□□ 0.14
USP35-202ENST00000528910 LMF2Q9BU23 707 aaKnown RBP15.9■□□□□ 0.14
USP35-202ENST00000528910 DEFB127Q9H1M4 99 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 NKIRAS1Q9NYS0 192 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 NOP53Q9NZM5 478 aaKnown RBP15.9■□□□□ 0.14
USP35-202ENST00000528910 SH3BP4Q9P0V3 963 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 NTMQ9P121 344 aa15.9■□□□□ 0.14
USP35-202ENST00000528910 SUCOQ9UBS9 1254 aaKnown RBP15.9■□□□□ 0.14
USP35-202ENST00000528910 OR14I1A6ND48 311 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 TTC36A6NLP5 189 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 CCL21O00585 134 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 ZG16O60844 167 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 CELA3AP09093 270 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 RFPL3SP0C7P2 107 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 GP1BBP13224 206 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 PTGDSP41222 190 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 CDK9P50750 372 aaKnown RBP15.89■□□□□ 0.13
USP35-202ENST00000528910 SNTA1Q13424 505 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 TRILQ7L0X0 811 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 CAMKMTQ7Z624 323 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 RIMKLAQ8IXN7 391 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 MGARPQ8TDB4 240 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 ARL8AQ96BM9 186 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 COL21A1Q96P44 957 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 OSBPL11Q9BXB4 747 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 UBQLN3Q9H347 655 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 MEAF6Q9HAF1 191 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 THAP1Q9NVV9 213 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 B4GALT7Q9UBV7 327 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 SH3BGRL2Q9UJC5 107 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 EIF3LQ9Y262 564 aaKnown RBP15.89■□□□□ 0.13
USP35-202ENST00000528910 MEMO1Q9Y316 297 aa15.89■□□□□ 0.13
USP35-202ENST00000528910 NUP214P35658 2090 aaPredicted RBP15.88■□□□□ 0.13
USP35-202ENST00000528910 ARHGAP21Q5T5U3 1957 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 PRAMEF25A6NGN4 478 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 AQP7O14520 342 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 PRRG2O14669 202 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 ZNHIT1O43257 154 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 SUSD5O60279 629 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 HCN1O60741 890 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 G6PDP11413 515 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 PRPS1L1P21108 318 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 ELAVL4P26378 380 aaKnown RBP15.88■□□□□ 0.13
USP35-202ENST00000528910 MAP3K8P41279 467 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 EFR3AQ14156 821 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 DESI1Q6ICB0 168 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 SLC30A6Q6NXT4 461 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 RPTNQ6XPR3 784 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 DOLPP1Q86YN1 238 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 SLC44A2Q8IWA5 706 aaPredicted RBP15.88■□□□□ 0.13
USP35-202ENST00000528910 TRIM42Q8IWZ5 723 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 NATD1Q8N6N6 113 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 OR7A2PQ8NGA2 310 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 PHF10Q8WUB8 498 aaKnown RBP15.88■□□□□ 0.13
USP35-202ENST00000528910 MS4A4EQ96PG1 132 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 SH3GL2Q99962 352 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 METTL7AQ9H8H3 244 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 AKTIPQ9H8T0 292 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 VIPAS39Q9H9C1 493 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 ACKR4Q9NPB9 350 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 SIRT3Q9NTG7 399 aaPredicted RBP15.88■□□□□ 0.13
USP35-202ENST00000528910 PNPOQ9NVS9 261 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 ARGLU1Q9NWB6 273 aaPredicted RBP15.88■□□□□ 0.13
USP35-202ENST00000528910 PLEKHB1Q9UF11 243 aaPredicted RBP15.88■□□□□ 0.13
USP35-202ENST00000528910 C15orf41Q9Y2V0 281 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 CACNA1CQ13936 2221 aa15.88■□□□□ 0.13
USP35-202ENST00000528910 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 ADAM10O14672 748 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 KLF11O14901 512 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 SNPHO15079 494 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 PDE9AO76083 593 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 CLDN1O95832 211 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 LAMP1P11279 417 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 ENDOUP21128 410 aaKnown RBP15.87■□□□□ 0.13
USP35-202ENST00000528910 GPC1P35052 558 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 PNLIPRP2P54317 469 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 MANFP55145 182 aaKnown RBP15.87■□□□□ 0.13
USP35-202ENST00000528910 CLDN8P56748 225 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 ADORA2A-AS1P86434 159 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 OCRLQ01968 901 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 CYP27C1Q4G0S4 372 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 TMEM198Q66K66 360 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 OGFOD2Q6N063 350 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 MAMDC2Q7Z304 686 aaPredicted RBP15.87■□□□□ 0.13
USP35-202ENST00000528910 CD163Q86VB7 1156 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 PACS2Q86VP3 889 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 EID3Q8N140 333 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 KRTCAP2Q8N6L1 136 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 OR4N2Q8NGD1 307 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 PSMA8Q8TAA3 256 aa15.87■□□□□ 0.13
USP35-202ENST00000528910 ITLN2Q8WWU7 325 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms