RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 OR2L13Q8N349 312 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 ZFP28Q8NHY6 868 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 TMBIM1Q969X1 311 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 PPCDCQ96CD2 204 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 COL21A1Q96P44 957 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 TSSK3Q96PN8 268 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 NODALQ96S42 347 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 UBQLN3Q9H347 655 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 CENPHQ9H3R5 247 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 EXO5Q9H790 373 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 METTL7AQ9H8H3 244 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 CHST11Q9NPF2 352 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 ACSS1Q9NUB1 689 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 ACAD8Q9UKU7 415 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 LIPGQ9Y5X9 500 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 CACNA1DQ01668 2161 aa11.09□□□□□ -0.63
TRAPPC4-209ENST00000528230 FIGNL2A6NMB9 653 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 PRSS44E7EML9 344 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 PDPK1O15530 556 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 WDR1O75083 606 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 ICOSLGO75144 302 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 LYPLA1O75608 230 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 LRATO95237 230 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 CLDN14O95500 239 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 HSPA4LO95757 839 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 HPNP05981 417 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 PRPS2P11908 318 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 KRT20P35900 424 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 PTGDSP41222 190 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 MC3RP41968 323 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 CORO7P57737 925 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 ABCE1P61221 599 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 PSG6Q00889 435 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 SMU1Q2TAY7 513 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 ATP6AP1LQ52LC2 224 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 C6orf136Q5SQH8 315 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 WLSQ5T9L3 541 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 TMEM107Q6UX40 140 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 C3P1Q6ZMU1 363 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 ACAD11Q709F0 780 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 SLC44A2Q8IWA5 706 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 NATD1Q8N6N6 113 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 OR1J4Q8NGS1 313 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 NEIL3Q8TAT5 605 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 AGR3Q8TD06 166 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 GFM2Q969S9 779 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZBED6CLQ96FA7 236 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 C3orf30Q96M34 536 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 GNRHR2Q96P88 292 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 OSBPL11Q9BXB4 747 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 KCNK9Q9NPC2 374 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 PNPLA3Q9NST1 481 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 DDX18Q9NVP1 670 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 COQ3Q9NZJ6 369 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 SH3BP4Q9P0V3 963 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 NTMQ9P121 344 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 BAIAP2L1Q9UHR4 511 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 ATP6V1HQ9UI12 483 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 C15orf41Q9Y2V0 281 aa11.08□□□□□ -0.64
TRAPPC4-209ENST00000528230 CACNA1CQ13936 2221 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 WDR91A4D1P6 747 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 PRAMEF25A6NGN4 478 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 SNPHO15079 494 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 AKAP10O43572 662 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 ITM2AO43736 263 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 PEX11AO75192 247 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 CBR3O75828 277 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 GABRA1P14867 456 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 ENDOUP21128 410 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 ACVR2AP27037 513 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 GDF1P27539 372 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 HTR1EP28566 365 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 PTPN6P29350 595 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 IL12BP29460 328 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 PTGER4P35408 488 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 CDK9P50750 372 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 SLC18A1P54219 525 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 MANFP55145 182 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 MAD2L1Q13257 205 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 MPP2Q14168 576 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 MLC1Q15049 377 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZNHIT3Q15649 155 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 CHI3L2Q15782 390 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 BEND6Q5SZJ8 279 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 CES4AQ5XG92 561 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 DESI1Q6ICB0 168 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 ANGPTL8Q6UXH0 198 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 NPSR1Q6W5P4 371 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 LARP4Q71RC2 724 aaKnown RBP eCLIP11.07□□□□□ -0.644e-8■■□□□ 13.7
TRAPPC4-209ENST00000528230 ZNF551Q7Z340 670 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 LIX1Q8N485 282 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 MARVELD2Q8N4S9 558 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 CEP70Q8NHQ1 597 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 ASB5Q8WWX0 329 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 RND1Q92730 232 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 HOXB13Q92826 284 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 DTNBP1Q96EV8 351 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 PKNOX2Q96KN3 472 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 ADOQ96SZ5 270 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms