RNA–Protein interactions for RNA: ENST00000528142.5

VPS28-209, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS28, Length 1,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-209ENST00000528142 EXOSC7Q15024 291 aaKnown RBP19.32■□□□□ 0.68
VPS28-209ENST00000528142 AMZ1Q400G9 498 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 PARP8Q8N3A8 854 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 Q8N9G6 341 aaPredicted RBP19.32■□□□□ 0.68
VPS28-209ENST00000528142 AQP11Q8NBQ7 271 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 GAB3Q8WWW8 586 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 HOXB13Q92826 284 aaPredicted RBP19.32■□□□□ 0.68
VPS28-209ENST00000528142 MMABQ96EY8 250 aaPredicted RBP19.32■□□□□ 0.68
VPS28-209ENST00000528142 STACQ99469 402 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 ZNF556Q9HAH1 456 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 IRAK4Q9NWZ3 460 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 MKLN1Q9UL63 735 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 PCDHGA6Q9Y5G7 932 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 CEPT1Q9Y6K0 416 aa19.32■□□□□ 0.68
VPS28-209ENST00000528142 MN1Q10571 1320 aaPredicted RBP19.31■□□□□ 0.68
VPS28-209ENST00000528142 A0A1W2PRQ8 180 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 H0YIG0 161 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 FAAHO00519 579 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 OXSR1O95747 527 aaPredicted RBP19.31■□□□□ 0.68
VPS28-209ENST00000528142 ALOX5P09917 674 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 EPHA8P29322 1005 aaPredicted RBP19.31■□□□□ 0.68
VPS28-209ENST00000528142 AVPR1BP47901 424 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 SLC13A2Q13183 592 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 DUSP8Q13202 625 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 DGCR6Q14129 220 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 MAD2L1BPQ15013 274 aaPredicted RBP19.31■□□□□ 0.68
VPS28-209ENST00000528142 DCST1Q5T197 706 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 LAIR1Q6GTX8 287 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 Q6ZPB1 254 aaPredicted RBP19.31■□□□□ 0.68
VPS28-209ENST00000528142 OR52P1PQ8NH57 321 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 SGCDQ92629 289 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 MYCBPQ99417 103 aaPredicted RBP19.31■□□□□ 0.68
VPS28-209ENST00000528142 ZNF350Q9GZX5 532 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 CXorf21Q9HAI6 301 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 NLGN3Q9NZ94 848 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 TMCC3Q9ULS5 477 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 SATB2Q9UPW6 733 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 MRPS33Q9Y291 106 aaKnown RBP19.31■□□□□ 0.68
VPS28-209ENST00000528142 GPR55Q9Y2T6 319 aaPredicted RBP19.31■□□□□ 0.68
VPS28-209ENST00000528142 WDR45Q9Y484 360 aa19.31■□□□□ 0.68
VPS28-209ENST00000528142 TNRC6BQ9UPQ9 1833 aaKnown RBP19.3■□□□□ 0.68
VPS28-209ENST00000528142 H3BSA7 217 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 OR10H2O60403 315 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 EEF1B2P24534 225 aaKnown RBP19.3■□□□□ 0.68
VPS28-209ENST00000528142 GGT2P36268 569 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 NUP107P57740 925 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 CXCR4P61073 352 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 FOXD4Q12950 439 aaPredicted RBP19.3■□□□□ 0.68
VPS28-209ENST00000528142 ERV3-1Q14264 604 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 PLK5Q496M5 336 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 FGD3Q5JSP0 725 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 B3GNT8Q7Z7M8 397 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 VWA5B2Q8N398 1253 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 D2HGDHQ8N465 521 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 UBE2FQ969M7 185 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 GTPBP3Q969Y2 492 aaKnown RBP19.3■□□□□ 0.68
VPS28-209ENST00000528142 PRRC1Q96M27 445 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 SAP130Q9H0E3 1048 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 PRTFDC1Q9NRG1 225 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 MAN2C1Q9NTJ4 1040 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 AASSQ9UDR5 926 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 BLOC1S6Q9UL45 172 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 A0A1B0GTQ1 180 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 ANGPTL1O95841 491 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 HTR1AP08908 422 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 POU2F1P14859 743 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 SEPHS1P49903 392 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 BTG2P78543 158 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 CCNJQ5T5M9 372 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 BROXQ5VW32 411 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 KLHL17Q6TDP4 642 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 KCTD8Q6ZWB6 473 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 C11orf74Q86VG3 221 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 DTWD2Q8NBA8 298 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 OR52R1Q8NGF1 315 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 SLC7A13Q8TCU3 470 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 SLC41A2Q96JW4 573 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 SUSD2Q9UGT4 822 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 IFT52Q9Y366 437 aa19.3■□□□□ 0.68
VPS28-209ENST00000528142 TP53BP1Q12888 1972 aaPredicted RBP19.29■□□□□ 0.68
VPS28-209ENST00000528142 SH3PXD2BA1X283 911 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 CLDN4O14493 209 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 TPST2O60704 377 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 ABCB7O75027 752 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 CDC123O75794 336 aaPredicted RBP19.29■□□□□ 0.68
VPS28-209ENST00000528142 UGT2B17O75795 530 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 ADAP00813 363 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 STX4Q12846 297 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 DCST2Q5T1A1 773 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 AP1ARQ63HQ0 302 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 WDR74Q6RFH5 385 aaPredicted RBP19.29■□□□□ 0.68
VPS28-209ENST00000528142 PRSS42Q7Z5A4 293 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 GATAD2AQ86YP4 633 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 GALNT12Q8IXK2 581 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 ENTHD1Q8IYW4 607 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 CLIP4Q8N3C7 705 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 METTL27Q8N6F8 245 aaPredicted RBP19.29■□□□□ 0.68
VPS28-209ENST00000528142 BPIFB6Q8NFQ5 453 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 OR51Q1Q8NH59 317 aa19.29■□□□□ 0.68
VPS28-209ENST00000528142 FNDC11Q9BVV2 318 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms