RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 HMGCS1Q01581 520 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 CSTF1Q05048 431 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 CAMK2DQ13557 499 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 LRRC32Q14392 662 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 GPR176Q14439 515 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PCBP2Q15366 365 aaKnown RBP eCLIP7.09□□□□□ -1.273e-6■■■□□ 17.8
SOX6-208ENST00000527619 CCDC85BQ15834 202 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 FAM189A2Q15884 450 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 RNF212Q495C1 297 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 TMEM35AQ53FP2 167 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PLA1AQ53H76 456 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 AKIRIN2Q53H80 203 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 NHLRC3Q5JS37 347 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 C9orf57Q5W0N0 161 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 AFMIDQ63HM1 303 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 JMJD6Q6NYC1 403 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 CLEC20AQ6ZU45 233 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MOB2Q70IA6 237 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 C16orf59Q7L2K0 433 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 ARMCX2Q7L311 632 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MON1AQ86VX9 555 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PTOV1Q86YD1 416 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 GPR65Q8IYL9 337 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 TRAM1L1Q8N609 369 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 OR4C15Q8NGM1 316 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 WFIKKN2Q8TEU8 576 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MEGF10Q96KG7 1140 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 OR2M2Q96R28 347 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MAPKAP1Q9BPZ7 522 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 C2orf88Q9BSF0 95 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 SLC29A3Q9BZD2 475 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 ZNF436Q9C0F3 470 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 OR51J1Q9H342 316 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 SLC25A19Q9HC21 320 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 NT5MQ9NPB1 228 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 NMRK2Q9NPI5 230 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 EQTNQ9NQ60 294 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PPP4R1LQ9P1A2 415 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MYEF2Q9P2K5 600 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 GNG14A0A1W2PPG7 69 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 SMIM30A4D0T7 59 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 FGF10O15520 208 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 SUV39H1O43463 412 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PRSS56P0CW18 603 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 BCKDHAP12694 445 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 SPI1P17947 270 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MAPK3P27361 379 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 ACLYP53396 1101 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 RPS14P62263 151 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 SPIBQ01892 262 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 CRYZQ08257 329 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 FGL1Q08830 312 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PTPRCAPQ14761 206 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PTGES3Q15185 160 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 FBXO47Q5MNV8 452 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MRM1Q6IN84 353 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 RGS7BPQ6MZT1 257 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 METTL7BQ6UX53 244 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 RNF165Q6ZSG1 346 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 TPGS1Q6ZTW0 290 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 TGIF2LXQ8IUE1 241 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MCATQ8IVS2 390 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 C12orf45Q8N5I9 185 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 PLA2G15Q8NCC3 412 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PROKR2Q8NFJ6 384 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 ST7LQ8TDW4 575 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 THAP3Q8WTV1 239 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 PLD4Q96BZ4 506 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 LINGO1Q96FE5 620 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 BSCL2Q96G97 398 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 FCRL4Q96PJ5 515 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 TEFMQ96QE5 360 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 FDXACB1Q9BRP7 624 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 MED10Q9BTT4 135 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MRPL37Q9BZE1 423 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 IPPKQ9H8X2 491 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 FZD3Q9NPG1 666 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 FAM212BQ9NTI7 297 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 SCP2D1Q9UJQ7 156 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 PURGQ9UJV8 347 aaKnown RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 ZNF214Q9UL59 606 aaPredicted RBP7.09□□□□□ -1.27
SOX6-208ENST00000527619 ARL5AQ9Y689 179 aa7.09□□□□□ -1.27
SOX6-208ENST00000527619 MEIKINA0A087WXM9 373 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 METTL21EPA6NDL7 271 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 ZAR1LA6NP61 321 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 CLIC1O00299 241 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 NPC1O15118 1278 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 ADAM12O43184 909 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 ENTPD6O75354 484 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 UBXN7O94888 489 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 MOCS2O96007 188 aaPredicted RBP7.08□□□□□ -1.28
SOX6-208ENST00000527619 B3GALT4O96024 378 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 CRYABP02511 175 aaKnown RBP7.08□□□□□ -1.28
SOX6-208ENST00000527619 MMP2P08253 660 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 SBK2P0C263 348 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 H2AFB1P0C5Y9 115 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 H2AFB2P0C5Z0 115 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 USP17L7P0C7H9 530 aa7.08□□□□□ -1.28
SOX6-208ENST00000527619 ATXN1LP0C7T5 689 aaKnown RBP7.08□□□□□ -1.28
SOX6-208ENST00000527619 CPEP16870 476 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms