RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TRMOQ9BU70 441 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 CRB3Q9BUF7 120 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 GGACTQ9BVM4 153 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 NKX6-2Q9C056 277 aaPredicted RBP3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 PRSS22Q9GZN4 317 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM49AQ9H0Q0 323 aaPredicted RBP3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 HDHD2Q9H0R4 259 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 MTIF3Q9H2K0 278 aaKnown RBP3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 PDZD7Q9H5P4 517 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 RNF122Q9H9V4 155 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 TMEM8AQ9HCN3 771 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 SIRT7Q9NRC8 400 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 PLSCR4Q9NRQ2 329 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC22A11Q9NSA0 550 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 KRT84Q9NSB2 600 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 C14orf105Q9NVL8 296 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 ZIM2Q9NZV7 527 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 CLEC2DQ9UHP7 191 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 PHF11Q9UIL8 331 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 ANAPC7Q9UJX3 599 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 PCDHA6Q9UN73 950 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 STARD10Q9Y365 291 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 MRPS18CQ9Y3D5 142 aaKnown RBP3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 LYVE1Q9Y5Y7 322 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 CRB1P82279 1406 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 NWD2Q9ULI1 1742 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 AFDNP55196 1824 aaKnown RBP3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 PHIPQ8WWQ0 1821 aa3.49□□□□□ -1.85
CLNS1A-209ENST00000527299 KDM3BQ7LBC6 1761 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PIK3C2BO00750 1634 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PTPRMP28827 1452 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SPATA31A1Q5TZJ5 1347 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SPATA31A5Q5VU36 1347 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM205AQ6ZU69 1335 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SPATA31A7Q8IWB4 1347 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A075B6Q4 140 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 KLF18A0A0U1RQI7 1052 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A0U1RQS6 177 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A1B0GW55 424 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A1W2PPM1 405 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 LNP1A1A4G5 178 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM149AA5PLN7 773 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 METTL21EPA6NDL7 271 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 NEMP2A6NFY4 417 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ARHGEF33A8MVX0 844 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 KCNU1A8MYU2 1149 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 B4DXG7 233 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 WASH3PC4AMC7 463 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 TMEM238C9JI98 176 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MCIDASD6RGH6 385 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 E5RJQ4 531 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 E7EWF7 191 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PRMT5O14744 637 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 TPP1O14773 563 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MYL12BO14950 172 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 BCAT2O15382 392 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 LRRTM2O43300 516 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 KLRC4O43908 158 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SSX4O60224 188 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 HPGDSO60760 199 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 CTAG2O75638 210 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SOAT2O75908 522 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 BEST1O76090 585 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 JTBO76095 146 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 CXCL14O95715 111 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 GLUD1P00367 558 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MMP1P03956 469 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 FHP07954 510 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SNRNP70P08621 437 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 IGFBP1P08833 259 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MMP10P09238 476 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DUX4L2P0CJ85 424 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DUX4L3P0CJ86 424 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DUX4L4P0CJ87 422 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DUX4L5P0CJ88 424 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DUX4L6P0CJ89 424 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DUX4L7P0CJ90 424 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 STAG3L3P0CL85 134 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SPP1P10451 314 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 NR2F6P10588 404 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 TPH1P17752 444 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MYL12AP19105 171 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 HLA-DPA1P20036 260 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 CHRM3P20309 590 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DDTP30046 118 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC6A4P31645 630 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 S100A11P31949 105 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 THBS4P35443 961 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 AHRP35869 848 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 TAGLN2P37802 199 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 LIPAP38571 399 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ACAA2P42765 397 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 TGM4P49221 684 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 GMPSP49915 693 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC12A3P55017 1021 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ARF5P84085 180 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 TFAMQ00059 246 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 BST1Q10588 318 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms