RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MAGED4Q96JG8 741 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 TOR3AQ9H497 397 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 PCDHGA3Q9Y5H0 932 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 PTPRBP23467 1997 aa17.53■□□□□ 0.4
SMPD1-203ENST00000527275 IGLV3-12A0A075B6K2 115 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 BCHEP06276 602 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 PORP16435 677 aaPredicted RBP17.52■□□□□ 0.4
SMPD1-203ENST00000527275 AGXTP21549 392 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 EFNA3P52797 238 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 STX4Q12846 297 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 EPS8Q12929 822 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 TMEM64Q6YI46 380 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 SHISA6Q6ZSJ9 500 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 TMEM151BQ8IW70 566 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 SLC44A2Q8IWA5 706 aaPredicted RBP17.52■□□□□ 0.4
SMPD1-203ENST00000527275 OFCC1Q8IZS5 231 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 OR9A2Q8NGT5 310 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 SLC35G5Q96KT7 338 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 MRPS26Q9BYN8 205 aaKnown RBP17.52■□□□□ 0.4
SMPD1-203ENST00000527275 REEP1Q9H902 201 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 FOXJ2Q9P0K8 574 aa17.52■□□□□ 0.4
SMPD1-203ENST00000527275 SAMHD1Q9Y3Z3 626 aaKnown RBP17.52■□□□□ 0.4
SMPD1-203ENST00000527275 DPM1O60762 260 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 SEC24DO94855 1032 aaPredicted RBP17.52■□□□□ 0.39
SMPD1-203ENST00000527275 TNFSF15O95150 251 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 PGM3O95394 542 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 CLPTM1O96005 669 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 FPR1P21462 350 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 PPP2R1BP30154 601 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 OCA2Q04671 838 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 MLIPQ5VWP3 458 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 TTC33Q6PID6 262 aaPredicted RBP17.52■□□□□ 0.39
SMPD1-203ENST00000527275 ZNF517Q6ZMY9 492 aaPredicted RBP17.52■□□□□ 0.39
SMPD1-203ENST00000527275 OVCH1Q7RTY7 1134 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 MR1Q95460 341 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 TMEM19Q96HH6 336 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 PTCHD1Q96NR3 888 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 BARD1Q99728 777 aaKnown RBP17.52■□□□□ 0.39
SMPD1-203ENST00000527275 ALOXE3Q9BYJ1 711 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 TGIF2Q9GZN2 237 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 SERHL2Q9H4I8 314 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 RUBCNLQ9H714 662 aa17.52■□□□□ 0.39
SMPD1-203ENST00000527275 THUMPD1Q9NXG2 353 aaKnown RBP17.52■□□□□ 0.39
SMPD1-203ENST00000527275 FREM2Q5SZK8 3169 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 ZGLP1P0C6A0 271 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 TNFRSF1BP20333 461 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 MATN1P21941 496 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 PRKAG1P54619 331 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 LAPTM4AQ15012 233 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 LTB4RQ15722 352 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 BHLHB9Q6PI77 547 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 TSEN54Q7Z6J9 526 aaKnown RBP17.51■□□□□ 0.39
SMPD1-203ENST00000527275 SMYD1Q8NB12 490 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 NRBF2Q96F24 287 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 GABARAPL1Q9H0R8 117 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 OR51I1Q9H343 314 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 NECTIN3Q9NQS3 549 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 FAM118AQ9NWS6 357 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 NDUFAF4Q9P032 175 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 MKL2Q9ULH7 1088 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 SDK2Q58EX2 2172 aa17.51■□□□□ 0.39
SMPD1-203ENST00000527275 OR12D1P0DN82 309 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 ATP6V1B1P15313 513 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 OR1E2P47887 323 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 RPS26P11Q5JNZ5 115 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-203ENST00000527275 TTC23Q5W5X9 447 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 ARMC8Q8IUR7 673 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 ZNF786Q8N393 782 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 GALNT15Q8N3T1 639 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 TSPAN14Q8NG11 270 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 SFXN5Q8TD22 340 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 MUS81Q96NY9 551 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 SPRY4Q9C004 299 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 PDP1Q9P0J1 537 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-203ENST00000527275 TMEFF2Q9UIK5 374 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-203ENST00000527275 C3orf18Q9UK00 162 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 ORC6Q9Y5N6 252 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 TMEM247A6NEH6 219 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 CNOT3O75175 753 aaKnown RBP17.5■□□□□ 0.39
SMPD1-203ENST00000527275 ATP1B1P05026 303 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 SLC35E2P0CK97 266 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 IGLV3-21P80748 117 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-203ENST00000527275 MAPK11Q15759 364 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 TMEM107Q6UX40 140 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 QSOX2Q6ZRP7 698 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 TMPRSS7Q7RTY8 843 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 ZNF555Q8NEP9 628 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 DOK4Q8TEW6 326 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 XAGE5Q8WWM1 108 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 MOAP1Q96BY2 351 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 RBM18Q96H35 190 aaKnown RBP17.5■□□□□ 0.39
SMPD1-203ENST00000527275 MBOAT4Q96T53 435 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 VN1R1Q9GZP7 353 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 ANKRA2Q9H9E1 313 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 MMACHCQ9Y4U1 282 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 PCDHGB3Q9Y5G1 929 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 PCDHGA8Q9Y5G5 932 aa17.5■□□□□ 0.39
SMPD1-203ENST00000527275 RECKO95980 971 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 TFAP2AP05549 437 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 RAD23AP54725 363 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms