RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 SH3BP4Q9P0V3 963 aa17.52■□□□□ 0.4
PKP3-204ENST00000526971 ATP6V1HQ9UI12 483 aa17.52■□□□□ 0.4
PKP3-204ENST00000526971 GPR55Q9Y2T6 319 aaPredicted RBP17.52■□□□□ 0.4
PKP3-204ENST00000526971 HRH3Q9Y5N1 445 aa17.52■□□□□ 0.4
PKP3-204ENST00000526971 CHCHD2Q9Y6H1 151 aaPredicted RBP17.52■□□□□ 0.4
PKP3-204ENST00000526971 TP53I11O14683 189 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 TFECO14948 347 aaPredicted RBP17.51■□□□□ 0.39
PKP3-204ENST00000526971 PDPK1O15530 556 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 SNNO75324 88 aaPredicted RBP17.51■□□□□ 0.39
PKP3-204ENST00000526971 NAGAP17050 411 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 ABCD3P28288 659 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 PIGAP37287 484 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 MC3RP41968 323 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 TMED10P49755 219 aaKnown RBP17.51■□□□□ 0.39
PKP3-204ENST00000526971 FBXW4P57775 412 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 EMX2Q04743 252 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 MAD2L1Q13257 205 aaPredicted RBP17.51■□□□□ 0.39
PKP3-204ENST00000526971 NNATQ16517 81 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 ATG16L1Q676U5 607 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 TMEM107Q6UX40 140 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 SPNS3Q6ZMD2 512 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 GK5Q6ZS86 529 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 TRIM42Q8IWZ5 723 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 PRR22Q8IZ63 422 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 FBXW8Q8N3Y1 598 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 OR5M3Q8NGP4 307 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 CIDECQ96AQ7 238 aaPredicted RBP17.51■□□□□ 0.39
PKP3-204ENST00000526971 ELP4Q96EB1 424 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 PPP1R36Q96LQ0 422 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 VSTM2LQ96N03 204 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 BTBD9Q96Q07 612 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 SH3GL2Q99962 352 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 MANSC1Q9H8J5 431 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 AKTIPQ9H8T0 292 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 MCCC2Q9HCC0 563 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 TAS2R9Q9NYW1 312 aa17.51■□□□□ 0.39
PKP3-204ENST00000526971 CNOT11Q9UKZ1 510 aaKnown RBP17.51■□□□□ 0.39
PKP3-204ENST00000526971 C19orf53Q9UNZ5 99 aaPredicted RBP17.51■□□□□ 0.39
PKP3-204ENST00000526971 EIF3LQ9Y262 564 aaKnown RBP17.51■□□□□ 0.39
PKP3-204ENST00000526971 FRG2CA6NGY1 282 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 SCAMP2O15127 329 aaKnown RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 TO15178 435 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 COQ9O75208 318 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 NME6O75414 186 aaPredicted RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 GLSO94925 669 aaPredicted RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 IFI6P09912 130 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 DDX5P17844 614 aaKnown RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 CAPN3P20807 821 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 HPCAL1P37235 193 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 RPL3P39023 403 aaKnown RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 FRKP42685 505 aaPredicted RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 DNASE1L1P49184 302 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 PPIAP62937 165 aaKnown RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 PLGLB1Q02325 96 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 FOXO1Q12778 655 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 PTGR1Q14914 329 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 RPS6KA2Q15349 733 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 TTMPQ5BVD1 217 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 RGS9BPQ6ZS82 235 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 ZNF551Q7Z340 670 aaPredicted RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 OR2L13Q8N349 312 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 SPPL2AQ8TCT8 520 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 ZBED6CLQ96FA7 236 aaPredicted RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 SECISBP2Q96T21 854 aaKnown RBP17.5■□□□□ 0.39
PKP3-204ENST00000526971 TTTY12Q9BZ98 90 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 NUF2Q9BZD4 464 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 IL1RL2Q9HB29 575 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 FOLH1BQ9HBA9 442 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 ASIC5Q9NY37 505 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 AKAP6Q13023 2319 aa17.5■□□□□ 0.39
PKP3-204ENST00000526971 ANKRD33BA6NCL7 494 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 UPK1AO00322 258 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 PRRG2O14669 202 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 HS6ST1O60243 411 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 ERN1O75460 977 aaKnown RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 PPM1BO75688 479 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 ABCB1P08183 1280 aaPredicted RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 CT45A8P0DMV1 189 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 CT45A9P0DMV2 189 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 G6PDP11413 515 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 IGFBP2P18065 325 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 PLCXD2Q0VAA5 305 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 CT45A2Q5DJT8 189 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 CMPK2Q5EBM0 449 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 PRAMEF20Q5VT98 475 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 CD163Q86VB7 1156 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 SLC22A16Q86VW1 577 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 ZFP28Q8NHY6 868 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 CA5BP1Q8WTZ4 195 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 DIO2Q92813 273 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 OMA1Q96E52 524 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 PROK2Q9HC23 129 aa17.49■□□□□ 0.39
PKP3-204ENST00000526971 NPDC1Q9NQX5 325 aaPredicted RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 ACSS1Q9NUB1 689 aaPredicted RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 DDX18Q9NVP1 670 aaKnown RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 TUBA8Q9NY65 449 aaPredicted RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 NOP53Q9NZM5 478 aaKnown RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 ZNF469Q96JG9 3925 aaPredicted RBP17.49■□□□□ 0.39
PKP3-204ENST00000526971 A0A1B0GTH9 108 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms