RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FAM111BQ6SJ93 734 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 IKBIPQ70UQ0 350 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 GALNTL5Q7Z4T8 443 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 SPATA19Q7Z5L4 167 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 HORMAD2Q8N7B1 307 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 APCDD1LQ8NCL9 501 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 OR7A2PQ8NGA2 310 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 OR4K14Q8NGD5 310 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 CEP70Q8NHQ1 597 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 ELP5Q8TE02 316 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 MARK4Q96L34 752 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 NPAS2Q99743 824 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 REEP4Q9H6H4 257 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 NPHS2Q9NP85 383 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 PFDN4Q9NQP4 134 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 SLC35C2Q9NQQ7 365 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 SDR39U1Q9NRG7 319 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-204ENST00000526430 NOP53Q9NZM5 478 aaKnown RBP10.06□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF639Q9UID6 485 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 DCTN4Q9UJW0 460 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 NUP214P35658 2090 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 A0A1B0GTH9 108 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 SCAMP2O15127 329 aaKnown RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 ARHGEF9O43307 516 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 PRKNO60260 465 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 GUCY1B2O75343 617 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 NEURL1O76050 574 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 MYO1DO94832 1006 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 SEC24DO94855 1032 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 SP1P08047 785 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 VIMP08670 466 aaKnown RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 GALNSP34059 522 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 ALDH9A1P49189 494 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 NUP107P57740 925 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 OR4D2P58180 307 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 SLC26A5P58743 744 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 DCAF7P61962 342 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 MAP4K2Q12851 820 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 HEPACAMQ14CZ8 416 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 LTB4RQ15722 352 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 PAPD4Q6PIY7 484 aaKnown RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 FUNDC1Q8IVP5 155 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 CCDC116Q8IYX3 515 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 ST13P4Q8IZP2 240 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 TMEM132CQ8N3T6 1108 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 KIF2BQ8N4N8 673 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 POGLUT1Q8NBL1 392 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF721Q8TF20 911 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 C10orf82Q8WW14 230 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 CIDECQ96AQ7 238 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 EXOSC8Q96B26 276 aaKnown RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 MTERF3Q96E29 417 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 CHMP6Q96FZ7 201 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 FAIM2Q9BWQ8 316 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 TMEM120AQ9BXJ8 343 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 GLIPR2Q9H4G4 154 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 CXorf21Q9HAI6 301 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 ADAP2Q9NPF8 381 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 TCF7L2Q9NQB0 619 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 PNO1Q9NRX1 252 aaKnown RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 MAT2BQ9NZL9 334 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 UTS2RQ9UKP6 389 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 EIF3LQ9Y262 564 aaKnown RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 MRPS33Q9Y291 106 aaKnown RBP10.05□□□□□ -0.8
NEDD8-204ENST00000526430 SPACA6W5XKT8 324 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 EML6Q6ZMW3 1958 aa10.05□□□□□ -0.8
NEDD8-204ENST00000526430 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 SAGE2PA6NJ88 616 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 C9JVG2 144 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 E9PBE3 544 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 H7C1Q1 480 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 NME2P1O60361 137 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 MAN1A2O60476 641 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 NME6O75414 186 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 CRLF1O75462 422 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ERAL1O75616 437 aaKnown RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 C1QCP02747 245 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ATP1B1P05026 303 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 PORP16435 677 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 CSNK2A2P19784 350 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 PRPS1L1P21108 318 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 NME2P22392 152 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 PIK3R1P27986 724 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 MAPK1P28482 360 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ASMTP46597 345 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 GNGT1P63211 74 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 PMPCAQ10713 525 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 FUT7Q11130 342 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 STX4Q12846 297 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 MAD2L1Q13257 205 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 BIKQ13323 160 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 SERTAD2Q14140 314 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 DAZAP2Q15038 168 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 ELAVL1Q15717 326 aaKnown RBP10.04□□□□□ -0.8
NEDD8-204ENST00000526430 MEP1AQ16819 746 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 SPRED3Q2MJR0 410 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 SLC25A35Q3KQZ1 300 aa10.04□□□□□ -0.8
NEDD8-204ENST00000526430 FLYWCH1Q4VC44 716 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms