RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 COPS8Q99627 209 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 LRRC1Q9BTT6 524 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 FUNDC2Q9BWH2 189 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 PRRG4Q9BZD6 226 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 OR2B2Q9GZK3 357 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 MIS12Q9H081 205 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 FOXP1Q9H334 677 aaPredicted RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 KAT8Q9H7Z6 458 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 LPAR2Q9HBW0 351 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 ADAP2Q9NPF8 381 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 NOX4Q9NPH5 578 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 POLE4Q9NR33 117 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 PARPBPQ9NWS1 579 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 LYARQ9NX58 379 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 NPAP1Q9NZP6 1156 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 SLC7A8Q9UHI5 535 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 UTS2RQ9UKP6 389 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 RIPK3Q9Y572 518 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CEP152O94986 1710 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 MIA2Q96PC5 1412 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 SYNMO15061 1565 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ANTXRLA6NF34 631 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ZNF99A8MXY4 864 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 GOLGA8KD6RF30 607 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 E9PQ18 207 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 H7C1Q1 480 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CLIC1O00299 241 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 HAT1O14929 419 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 TPST2O60704 377 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 LRCH4O75427 683 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 GRAP2O75791 330 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 BRI3O95415 125 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 TXNDC12O95881 172 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 HPRP00739 348 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 EGFP01133 1207 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PIGRP01833 764 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ATP1B2P14415 290 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 PPP2R1BP30154 601 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SRD5A2P31213 254 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 APOBEC3AP31941 199 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 CNR2P34972 360 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 MPLP40238 635 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CDKN2CP42773 168 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PLA2G16P53816 162 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ELLP55199 621 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 NAAAQ02083 359 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 STX5Q13190 355 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SNTA1Q13424 505 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 FZD5Q13467 585 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PEX6Q13608 980 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SPHARQ15513 63 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 EFNB3Q15768 340 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 UAP1Q16222 522 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 MRPL23Q16540 153 aaKnown RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 SGCAQ16586 387 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 MOGQ16653 247 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CDKN3Q16667 212 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 GGTA1PQ4G0N0 100 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ZNF385BQ569K4 471 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ARMCX4Q5H9R4 360 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PAPD7Q5XG87 772 aaKnown RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 SLC8B1Q6J4K2 584 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 C11orf63Q6NUN7 778 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 FUT10Q6P4F1 479 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 TTC33Q6PID6 262 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 VITQ6UXI7 678 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PLEKHG7Q6ZR37 379 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 MON1BQ7L1V2 547 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 DHDDSQ86SQ9 333 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 KCNMB4Q86W47 210 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CCDC25Q86WR0 208 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PLD3Q8IV08 490 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ITPRIPQ8IWB1 547 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 MAP7D3Q8IWC1 876 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ZNF444Q8N0Y2 327 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 GPC2Q8N158 579 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SPEM1Q8N4L4 309 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CNBD1Q8NA66 436 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 B3GALNT2Q8NCR0 500 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SPATA22Q8NHS9 363 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 NUDCD2Q8WVJ2 157 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 TMEM37Q8WXS4 190 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 MYLIPQ8WY64 445 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SMPDL3AQ92484 453 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SMPDL3BQ92485 455 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 FAM168AQ92567 244 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 FKBP10Q96AY3 582 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 MTBPQ96DY7 904 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 DUS3LQ96G46 650 aaKnown RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 P2RY11Q96G91 374 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SNF8Q96H20 258 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 GRAMD2BQ96HH9 432 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CPB2Q96IY4 423 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CXorf58Q96LI9 332 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ZNF578Q96N58 590 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 RIT2Q99578 217 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CTRCQ99895 268 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 TTYH2Q9BSA4 534 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 MED10Q9BTT4 135 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 DPH7Q9BTV6 452 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms