RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PDCD4Q53EL6 469 aaKnown RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF385BQ569K4 471 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ATAD3BQ5T9A4 648 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 FHL5Q5TD97 284 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 OR4F3Q6IEY1 312 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 MFSD12Q6NUT3 480 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC30A6Q6NXT4 461 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 MTFR2Q6P444 385 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZCCHC12Q6PEW1 402 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ANGPTL8Q6UXH0 198 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 TMEM64Q6YI46 380 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 LARP4Q71RC2 724 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 RIMKLAQ8IXN7 391 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 FAM109AQ8N4B1 249 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 CPSF7Q8N684 471 aaKnown RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 COX18Q8N8Q8 333 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZFP62Q8NB50 900 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 OR8J2Q8NGG1 315 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 OR4A15Q8NGL6 344 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 PRR7Q8TB68 274 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 SPPL2AQ8TCT8 520 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 GPR151Q8TDV0 419 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ADAMTS15Q8TE58 950 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC9A6Q92581 669 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 TMBIM1Q969X1 311 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 COQ8BQ96D53 544 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 MAELQ96JY0 434 aaKnown RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 GPR137Q96N19 417 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 RILPQ96NA2 401 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 TAAR6Q96RI8 345 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ADOQ96SZ5 270 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 BARD1Q99728 777 aaKnown RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 G6PC3Q9BUM1 346 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 CCDC28BQ9BUN5 200 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 OSBPL11Q9BXB4 747 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 TSPAN10Q9H1Z9 355 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 RABEP2Q9H5N1 569 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 LDAHQ9H6V9 325 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ANKRA2Q9H9E1 313 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 IL1RL2Q9HB29 575 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 NPHS2Q9NP85 383 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZFP64Q9NPA5 681 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLCO1B3Q9NPD5 702 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 SDHAF3Q9NRP4 125 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 MRGBPQ9NV56 204 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZIM2Q9NZV7 527 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 SUCOQ9UBS9 1254 aaKnown RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 CBLCQ9ULV8 474 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 NPIPA1Q9UND3 350 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 DTX4Q9Y2E6 619 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 NTNG1Q9Y2I2 539 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 GPR55Q9Y2T6 319 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 CHCHD2Q9Y6H1 151 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 CFAP47Q6ZTR5 3102 aa4.97□□□□□ -1.61
HMGB1P40-201ENST00000525121 CHD6Q8TD26 2715 aa4.96□□□□□ -1.61
HMGB1P40-201ENST00000525121 SPTA1P02549 2419 aa4.96□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZFHX4Q86UP3 3567 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A0G2JND7 137 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A1B0GUH1 482 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PRSS51A0A1B0GVH4 220 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 DUXAA6NLW8 204 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 FAM47E-STBD1D6RA91 191 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 DYNC1I1O14576 645 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PRRG2O14669 202 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ASNA1O43681 348 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC19A2O60779 497 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 EDF1O60869 148 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 UGT2B11O75310 529 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PSMG1O95456 288 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CBX6O95503 412 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CPSF4O95639 269 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 AGR2O95994 175 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 AK1P00568 194 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 HMGN2P05204 90 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PGRP06401 933 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CT45A8P0DMV1 189 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CT45A9P0DMV2 189 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 UQCRC2P22695 453 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 LCN1P31025 176 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 RFC3P40938 356 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 DNASE1L1P49184 302 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 KHKP50053 298 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 IDH3AP50213 366 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 TDGF1P3P51864 188 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PNLIPRP2P54317 469 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 KCNK10P57789 538 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 UFM1P61960 85 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 POU6F2P78424 691 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 TXNL4AP83876 142 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 HPCAP84074 193 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PSG6Q00889 435 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 DUSP8Q13202 625 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 MRPL49Q13405 166 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 LASP1Q14847 261 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PRSS53Q2L4Q9 553 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CT45A2Q5DJT8 189 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 SPANXN4Q5MJ08 99 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 C6orf10Q5SRN2 563 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CDC73Q6P1J9 531 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms