RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NUP107P57740 925 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 PMPCAQ10713 525 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 HSPB3Q12988 150 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 CHI3L2Q15782 390 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 EID3Q8N140 333 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 LIX1Q8N485 282 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 NUDT8Q8WV74 236 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 SARAFQ96BY9 339 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 EFHD2Q96C19 240 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 PPCDCQ96CD2 204 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 ELP4Q96EB1 424 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 TMEM41AQ96HV5 264 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 COL21A1Q96P44 957 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 BTBD9Q96Q07 612 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 C1orf50Q9BV19 199 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 OSBPL11Q9BXB4 747 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 DDX18Q9NVP1 670 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 KLRF1Q9NZS2 232 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 C19orf53Q9UNZ5 99 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 MAPRE3Q9UPY8 281 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR10H1Q9Y4A9 318 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 KLF2Q9Y5W3 355 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 NCOA6Q14686 2063 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 A0A087WV62 115 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 C15orf38-AP3S2A0A0A6YYH1 394 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 PRAMEF25A6NGN4 478 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 C19orf84I3L1E1 186 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 PLOD2O00469 737 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 TSPAN2O60636 221 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 COQ9O75208 318 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 ACVR2AP27037 513 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 PTPN6P29350 595 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 IL12BP29460 328 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 GPC1P35052 558 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 KRT20P35900 424 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 PSG6Q00889 435 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZNF630Q2M218 657 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 EIPR1Q53HC9 387 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 XKR7Q5GH72 579 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 TNFAIP8L3Q5GJ75 292 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 WIPI1Q5MNZ9 446 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 WLSQ5T9L3 541 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 TIGD3Q6B0B8 471 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 TMEM211Q6ICI0 200 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 SLC30A6Q6NXT4 461 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 LARP4Q71RC2 724 aaKnown RBP eCLIP11.74□□□□□ -0.531e-9■□□□□ 11.3
TRAPPC4-205ENST00000525079 CCDC71Q8IV32 467 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 ANKRD42Q8N9B4 389 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR1J4Q8NGS1 313 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 NEIL3Q8TAT5 605 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 NTNG2Q96CW9 530 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 PPP1R36Q96LQ0 422 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 PPP3R2Q96LZ3 170 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 PAIP2Q9BPZ3 127 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 C20orf27Q9GZN8 174 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 STMN4Q9H169 189 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 SSU72Q9NP77 194 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 ACKR4Q9NPB9 350 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 EQTNQ9NQ60 294 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 QPCTLQ9NXS2 382 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 COQ3Q9NZJ6 369 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 C15orf41Q9Y2V0 281 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 SLC6A5Q9Y345 797 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 TMED5Q9Y3A6 229 aa11.74□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR6C70A6NIJ9 312 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 FIGNL2A6NMB9 653 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 TM9SF1O15321 606 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 SERPINE1P05121 402 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 FREM3P0C091 2139 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 DHRS4L1P0CG22 281 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 AGAP20933 346 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 BGNP21810 368 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 RFX3P48380 749 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 CDK9P50750 372 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 PRKAG1P54619 331 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 MANFP55145 182 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 ABCE1P61221 599 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 GAB1Q13480 694 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 PDE7AQ13946 482 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 PDCD2Q16342 344 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 ATP6AP1LQ52LC2 224 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 C6orf136Q5SQH8 315 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 IL23RQ5VWK5 629 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 RTL6Q6ICC9 239 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR5M10Q6IEU7 315 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 LRIG3Q6UXM1 1119 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 YRDCQ86U90 279 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR2L13Q8N349 312 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZNF781Q8N8C0 355 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 FNDC5Q8NAU1 212 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR7A2PQ8NGA2 310 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR10Q1Q8NGQ4 319 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 CA5BP1Q8WTZ4 195 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 RND1Q92730 232 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 MARVELD3Q96A59 401 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 TUBGCP3Q96CW5 907 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 TMCO6Q96DC7 493 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 PGM2Q96G03 612 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 SLC35A4Q96G79 324 aa11.73□□□□□ -0.53
TRAPPC4-205ENST00000525079 UCK2Q9BZX2 261 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms