RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 LRRC74AQ0VAA2 488 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 SNTA1Q13424 505 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 EFR3AQ14156 821 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 KRTCAP3Q53RY4 240 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 NXNQ6DKJ4 435 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 FAM47EQ6ZV65 393 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 FAM13CQ8NE31 585 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 NUP43Q8NFH3 380 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 OR56A1Q8NGH5 318 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 RNF138Q8WVD3 245 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 HGDQ93099 445 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 FAM120BQ96EK7 910 aaKnown RBP13.89□□□□□ -0.19
SF3B2-202ENST00000524475 PROK2Q9HC23 129 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 TMEM45AQ9NWC5 275 aa13.89□□□□□ -0.19
SF3B2-202ENST00000524475 DYNC1I1O14576 645 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 GLSO94925 669 aaPredicted RBP13.88□□□□□ -0.19
SF3B2-202ENST00000524475 C6orf47O95873 294 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 MST1P26927 711 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 PNLIPRP2P54317 469 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 AQP5P55064 265 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 FBXW4P57775 412 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 UFM1P61960 85 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 HBA1P69905 142 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 ALDH6A1Q02252 535 aaKnown RBP13.88□□□□□ -0.19
SF3B2-202ENST00000524475 FOXO1Q12778 655 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 NNATQ16517 81 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 PGS1Q32NB8 556 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 SPANXN4Q5MJ08 99 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 OR4F3Q6IEY1 312 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 MFSD12Q6NUT3 480 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 BHLHB9Q6PI77 547 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 MSANTD1Q6ZTZ1 278 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 SLC44A2Q8IWA5 706 aaPredicted RBP13.88□□□□□ -0.19
SF3B2-202ENST00000524475 GOT1L1Q8NHS2 421 aaPredicted RBP13.88□□□□□ -0.19
SF3B2-202ENST00000524475 NUDT8Q8WV74 236 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 TMBIM1Q969X1 311 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 TEX37Q96LM6 180 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 GPR137Q96N19 417 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 COL21A1Q96P44 957 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 ZBTB18Q99592 522 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 ANGPTL4Q9BY76 406 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 CXorf36Q9H7Y0 433 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 IL1RL2Q9HB29 575 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 Q9N2J8 555 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 ZCCHC3Q9NUD5 404 aaKnown RBP13.88□□□□□ -0.19
SF3B2-202ENST00000524475 BTNL2Q9UIR0 455 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 MRTO4Q9UKD2 239 aaKnown RBP13.88□□□□□ -0.19
SF3B2-202ENST00000524475 LRRK2Q5S007 2527 aa13.88□□□□□ -0.19
SF3B2-202ENST00000524475 A0A0G2JMM0 328 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 A0A1W2PPB8 328 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 A0A1W2PRS3 328 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 ANKUB1A6NFN9 424 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 KIR3DP1A8MWS1 328 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 ACOT7O00154 380 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 TRIM3O75382 744 aaPredicted RBP13.87□□□□□ -0.19
SF3B2-202ENST00000524475 SLC22A3O75751 556 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 SNX4O95219 450 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 IL6P05231 212 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 PGRP06401 933 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 KRT16P08779 473 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 IL12AP29459 219 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 S100A3P33764 101 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 PIGAP37287 484 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 CASP3P42574 277 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 CCT3P49368 545 aaKnown RBP13.87□□□□□ -0.19
SF3B2-202ENST00000524475 PRIM2P49643 509 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 PSMD4P55036 377 aaKnown RBP13.87□□□□□ -0.19
SF3B2-202ENST00000524475 GPR85P60893 370 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 PHC1P78364 1004 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 FAM174BQ3ZCQ3 159 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 RNFT1Q5M7Z0 435 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 TMEM198Q66K66 360 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 PRR22Q8IZ63 422 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 DIO2Q92813 273 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 TMCO6Q96DC7 493 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 MAGED4Q96JG8 741 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 CCDC115Q96NT0 180 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 STACQ99469 402 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 TTTY12Q9BZ98 90 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 ZDHHC11Q9H8X9 412 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 DUSP22Q9NRW4 184 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 CBLCQ9ULV8 474 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 BOKQ9UMX3 212 aaPredicted RBP13.87□□□□□ -0.19
SF3B2-202ENST00000524475 PCDHGB4Q9UN71 923 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 OR10H1Q9Y4A9 318 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 USP9XQ93008 2570 aaPredicted RBP13.87□□□□□ -0.19
SF3B2-202ENST00000524475 NINQ8N4C6 2090 aa13.87□□□□□ -0.19
SF3B2-202ENST00000524475 PINLYPA6NC86 204 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 UGT2B11O75310 529 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 NME6O75414 186 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-202ENST00000524475 IL33O95760 270 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 EFNA1P20827 205 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-202ENST00000524475 IL12BP29460 328 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 LCN1P31025 176 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 KRT20P35900 424 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 ATP4BP51164 291 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 GAB1Q13480 694 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 DECR1Q16698 335 aa13.86□□□□□ -0.19
SF3B2-202ENST00000524475 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms