RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	EMG1	Q92979	244 aa	Known RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	GLYATL1	Q969I3	302 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	ZNF707	Q96C28	371 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	MTERF3	Q96E29	417 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	DYNLL2	Q96FJ2	89 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	FAM71F1	Q96KD3	344 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CATSPER2	Q96P56	530 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CASD1	Q96PB1	797 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	MTERF1	Q99551	399 aa	Known RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	BTBD10	Q9BSF8	475 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	TMEM43	Q9BTV4	400 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	PRRG4	Q9BZD6	226 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	IQCG	Q9H095	443 aa	Known RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	C8orf33	Q9H7E9	229 aa	Predicted RBP	3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	SYNDIG1	Q9H7V2	258 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	CNGB3	Q9NQW8	809 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	GSN-AS1	Q9NRJ2	163 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	ACOXL	Q9NUZ1	547 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	PTTG2	Q9NZH5	202 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	RNF14	Q9UBS8	474 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	UTS2R	Q9UKP6	389 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	C15orf41	Q9Y2V0	281 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	IFT52	Q9Y366	437 aa		3.88	□□□□□ -1.79
PCM1-223	ENST00000524356	ZNFX1	Q9P2E3	1918 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	COL4A6	Q14031	1691 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CHD6	Q8TD26	2715 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	DNAH14	Q0VDD8	3507 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	DOCK2	Q92608	1830 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	LINC01553	A4QN01	128 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	RNF222	A6NCQ9	220 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	C17orf105	B2RV13	164 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	TCP11X1	B4DZS4	312 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	TMEM150C	B9EJG8	249 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356		J3KR12	359 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CCL24	O00175	119 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	FOXE1	O00358	373 aa	Predicted RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	EEF2K	O00418	725 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	INPPL1	O15357	1258 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	RRP8	O43159	456 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SCO2	O43819	266 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	EXTL3	O43909	919 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	FCMR	O60667	390 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SDC3	O75056	442 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SERPINI2	O75830	405 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CRYGC	P07315	174 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SFTPB	P07988	381 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	PNMT	P11086	282 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ODC1	P11926	461 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CPN1	P15169	458 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CYP11B1	P15538	503 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	TUBG1	P23258	451 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	DPP4	P27487	766 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CD1B	P29016	333 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	GJB2	P29033	226 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	TACR3	P29371	465 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	BDKRB2	P30411	391 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SRD5A2	P31213	254 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	HNRNPH1	P31943	449 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	TRIM23	P36406	574 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SLC6A8	P48029	635 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	NR0B1	P51843	470 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	THOP1	P52888	689 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CLDN8	P56748	225 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CSTF1	Q05048	431 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ZNF415	Q09FC8	603 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	DMP1	Q13316	513 aa	Predicted RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	DHX34	Q14147	1143 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ELAVL3	Q14576	367 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	RBBP5	Q15291	538 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	POM121L1P	Q3SYA9	428 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	TCEAL5	Q5H9L2	206 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	EARS2	Q5JPH6	523 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ASPHD1	Q5U4P2	390 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	AGBL2	Q5U5Z8	902 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ATL3	Q6DD88	541 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ZSCAN25	Q6NSZ9	544 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ERICH5	Q6P6B1	374 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	TRIM65	Q6PJ69	517 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	C6orf89	Q6UWU4	347 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SYT10	Q6XYQ8	523 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	BZW1	Q7L1Q6	419 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ZNF367	Q7RTV3	350 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	GPR141	Q7Z602	305 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	LHFPL4	Q7Z7J7	247 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	YRDC	Q86U90	279 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CD302	Q8IX05	232 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	MMD2	Q8IY49	270 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CSGALNACT2	Q8N6G5	542 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	C1orf52	Q8N6N3	182 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ANKFN1	Q8N957	763 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	OR5D13	Q8NGL4	314 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	PNPT1	Q8TCS8	783 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	PHYHIP	Q92561	330 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	RND1	Q92730	232 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	RAB39B	Q96DA2	213 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	MSANTD3	Q96H12	275 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SENP5	Q96HI0	755 aa	Predicted RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	IGSF21	Q96ID5	467 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	VPS35	Q96QK1	796 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms