RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 METTL25Q8N6Q8 603 aa19.84■□□□□ 0.77
R3HCC1-208ENST00000522012 WDR70Q9NW82 654 aa19.84■□□□□ 0.77
R3HCC1-208ENST00000522012 GXYLT2A0PJZ3 443 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 TERTO14746 1132 aaKnown RBP19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 GCM2O75603 506 aaPredicted RBP19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 SOX30O94993 753 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 PGM3O95394 542 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 CLCN2P51788 898 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 GPR143P51810 404 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 CRISP3P54108 245 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 MRPS22P82650 360 aaKnown RBP19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 PSG6Q00889 435 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 PCOLCEQ15113 449 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 NNATQ16517 81 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 HEPHL1Q6MZM0 1159 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 KIRREL2Q6UWL6 708 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 SLC29A4Q7RTT9 530 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 OLIG3Q7RTU3 272 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 DTX1Q86Y01 620 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 HOXB13Q92826 284 aaPredicted RBP19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 TRNT1Q96Q11 434 aaKnown RBP19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 GAL3ST4Q96RP7 486 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 ZNF700Q9H0M5 742 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 KCND3Q9UK17 655 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 V9GYQ6 96 aa19.83■□□□□ 0.77
R3HCC1-208ENST00000522012 NUP214P35658 2090 aaPredicted RBP19.83■□□□□ 0.76
R3HCC1-208ENST00000522012 IGHV1-45A0A0A0MS14 117 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 C2orf92A0A1B0GVN3 265 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 TRABD2BA6NFA1 517 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 OR6C76A6NM76 312 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 H6PDO95479 791 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 CHRM4P08173 479 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 SLC26A5P58743 744 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 POU6F2P78424 691 aaPredicted RBP19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 HPCAP84074 193 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 RHDQ02161 417 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 MTX3Q5HYI7 312 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 HLA-DQA1Q5Y7H0 255 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 NPSR1Q6W5P4 371 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 C9orf40Q8IXQ3 194 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 C10orf67Q8IYJ2 551 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 TREX2Q9BQ50 279 aaPredicted RBP19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 BTBD2Q9BX70 525 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 FAM117AQ9C073 453 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 Q9N2J8 555 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 DCAF13Q9NV06 445 aaKnown RBP19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 KLK13Q9UKR3 277 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 PPIEQ9UNP9 301 aaKnown RBP19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 OR10H1Q9Y4A9 318 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 SEC16AO15027 2179 aa19.82■□□□□ 0.76
R3HCC1-208ENST00000522012 TCRBV5S2A0A599 114 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 TCRBV3S1A0A5B6 114 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 TTC36A6NLP5 189 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 M0QX08 132 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 SOCS6O14544 535 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 PRKNO60260 465 aaPredicted RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 C8BP07358 591 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 CT45A8P0DMV1 189 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 CT45A9P0DMV2 189 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 COX6A1P12074 109 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 TGIF1Q15583 401 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 ARHGAP11BQ3KRB8 267 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 CT45A2Q5DJT8 189 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 DCST2Q5T1A1 773 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 CCNJQ5T5M9 372 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 HSDL2Q6YN16 418 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 CCDC80Q76M96 950 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 PPP1R32Q7Z5V6 425 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 PATL1Q86TB9 770 aaKnown RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 APCDD1LQ8NCL9 501 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 OR52E4Q8NGH9 312 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 PYDC1Q8WXC3 89 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 KIAA1143Q96AT1 154 aaPredicted RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 RMND5BQ96G75 393 aaPredicted RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 VMP1Q96GC9 406 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 SEMA4CQ9C0C4 833 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 RUBCNLQ9H714 662 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 GPN2Q9H9Y4 310 aaPredicted RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 CALML5Q9NZT1 146 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 GPR55Q9Y2T6 319 aaPredicted RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 ZNF451Q9Y4E5 1061 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 MRPS18BQ9Y676 258 aaKnown RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 TRBV11-1A0A0K0K1C0 115 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 MGRN1O60291 552 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 KRT36O76013 467 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 ZNF682O95780 498 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 PPICP45877 212 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 PCBP3P57721 371 aaKnown RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 EBPQ15125 230 aaKnown RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 BTBD16Q32M84 506 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 FIGNL1Q6PIW4 674 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 NDUFAF7Q7L592 441 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 CHDHQ8NE62 594 aaPredicted RBP19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 OR11G2Q8NGC1 345 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 OR4N2Q8NGD1 307 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 BBS10Q8TAM1 723 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 NXPE2Q96DL1 559 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 BTBD9Q96Q07 612 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 ZNF607Q96SK3 696 aa19.81■□□□□ 0.76
R3HCC1-208ENST00000522012 SDF2Q99470 211 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms