RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 TBX19O60806 448 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 ICOSLGO75144 302 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 BCKDHAP12694 445 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 TRPC1P48995 793 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 PSG6Q00889 435 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 MPP2Q14168 576 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 ZNF385BQ569K4 471 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 XKR7Q5GH72 579 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 TIGD3Q6B0B8 471 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 SLC30A6Q6NXT4 461 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 ZNF551Q7Z340 670 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 SLC44A2Q8IWA5 706 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 OR4N2Q8NGD1 307 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 CLHC1Q8NHS4 586 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 NEIL3Q8TAT5 605 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 SDCCAG3Q96C92 435 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 SLC35A4Q96G79 324 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 ZNF764Q96H86 408 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 PPP3R2Q96LZ3 170 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 C3orf30Q96M34 536 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 ADOQ96SZ5 270 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 UBQLN3Q9H347 655 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 ZNF395Q9H8N7 513 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 C15orf41Q9Y2V0 281 aa16.35■□□□□ 0.21
TRAPPC9-211ENST00000521700 ITM2AO43736 263 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PEX11AO75192 247 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 COQ9O75208 318 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 LYPLA1O75608 230 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 TRAPPC6AO75865 159 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PSMG1O95456 288 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 HPNP05981 417 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 DHRS4L1P0CG22 281 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 ACVR2AP27037 513 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 CDK9P50750 372 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PMPCAQ10713 525 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 SNTA1Q13424 505 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PDE7AQ13946 482 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 RTL6Q6ICC9 239 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 ANGPTL8Q6UXH0 198 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 OR2L13Q8N349 312 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PPP1R14CQ8TAE6 165 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 CIDECQ96AQ7 238 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PPCDCQ96CD2 204 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 TMCO6Q96DC7 493 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PGM2Q96G03 612 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 OSBPL11Q9BXB4 747 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 GALNT9Q9HCQ5 603 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 COQ3Q9NZJ6 369 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 SH3BP4Q9P0V3 963 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PHF3Q92576 2039 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 CENPEQ02224 2701 aa16.34■□□□□ 0.21
TRAPPC9-211ENST00000521700 PRAMEF25A6NGN4 478 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 SNPHO15079 494 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 TM9SF1O15321 606 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 BIRC5O15392 142 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 PDPK1O15530 556 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 HNRNPRO43390 633 aaKnown RBP16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 ABCB7O75027 752 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 SKAP2O75563 359 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 SERPINE1P05121 402 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 IFI6P09912 130 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 ELAVL4P26378 380 aaKnown RBP16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 PTPN6P29350 595 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 ASMTP46597 345 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 NUP107P57740 925 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 PSPHP78330 225 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 ZNF155Q12901 538 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 HSPB3Q12988 150 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 CHI3L2Q15782 390 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 C6orf136Q5SQH8 315 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 WLSQ5T9L3 541 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 LRIG3Q6UXM1 1119 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 LARP4Q71RC2 724 aaKnown RBP eCLIP16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 CROCCP2Q86T23 111 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 LIX1Q8N485 282 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 OR1J4Q8NGS1 313 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 RND1Q92730 232 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 KCNK9Q9NPC2 374 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 CHST11Q9NPF2 352 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 DDX18Q9NVP1 670 aaKnown RBP16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 ALKBH4Q9NXW9 302 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 KLRF1Q9NZS2 232 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 RNF6Q9Y252 685 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 FAM215AQ9Y5M1 114 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 ACTL7BQ9Y614 415 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 CACNA1CQ13936 2221 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 NOTCH2Q04721 2471 aa16.33■□□□□ 0.2
TRAPPC9-211ENST00000521700 FIGNL2A6NMB9 653 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 TMEM114B3SHH9 223 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 C19orf84I3L1E1 186 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 WDR1O75083 606 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 HSPA4LO95757 839 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 KRT20P35900 424 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 FRKP42685 505 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 PNLIPRP2P54317 469 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 GAB1Q13480 694 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 EFR3AQ14156 821 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 ATP6AP1LQ52LC2 224 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 EIPR1Q53HC9 387 aa16.32■□□□□ 0.2
TRAPPC9-211ENST00000521700 ACAD11Q709F0 780 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms