RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ABCA4P78363 2273 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 DLX3O60479 287 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 ABCB7O75027 752 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 NME6O75414 186 aaPredicted RBP13.79□□□□□ -0.2
CSMD1-207ENST00000520451 ERN1O75460 977 aaKnown RBP13.79□□□□□ -0.2
CSMD1-207ENST00000520451 EPXP11678 715 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 DRD2P14416 443 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 HTR6P50406 440 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 CORO7P57737 925 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 RAE1P78406 368 aaKnown RBP13.79□□□□□ -0.2
CSMD1-207ENST00000520451 SORDQ00796 357 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 HMGCS1Q01581 520 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 ACSM2AQ08AH3 577 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 FOXF2Q12947 444 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 SPIN4Q56A73 249 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 ACSM2BQ68CK6 577 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 TIFABQ6ZNK6 161 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 IFNEQ86WN2 208 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 PLCZ1Q86YW0 608 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 TRIM42Q8IWZ5 723 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 SAMD14Q8IZD0 417 aaPredicted RBP13.79□□□□□ -0.2
CSMD1-207ENST00000520451 GBP7Q8N8V2 638 aaPredicted RBP13.79□□□□□ -0.2
CSMD1-207ENST00000520451 LINC01560Q8TB33 94 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 ERP27Q96DN0 273 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 MTBPQ96DY7 904 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 SLC35A4Q96G79 324 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 ADOQ96SZ5 270 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 JKAMPQ9P055 326 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 FBXL2Q9UKC9 423 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 WIF1Q9Y5W5 379 aa13.79□□□□□ -0.2
CSMD1-207ENST00000520451 CLCA1A8K7I4 914 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 ABHD2P08910 425 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 CTAGE8P0CG41 777 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 CT45A8P0DMV1 189 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 CT45A9P0DMV2 189 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 KLK2P20151 261 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 ATP5F1P24539 256 aaPredicted RBP13.78□□□□□ -0.2
CSMD1-207ENST00000520451 GCAP28676 217 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 IL12BP29460 328 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 SRD5A2P31213 254 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 TIA1P31483 386 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSMD1-207ENST00000520451 KRT20P35900 424 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 STARP49675 285 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 GFRA1P56159 465 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 EFR3AQ14156 821 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 HEPACAMQ14CZ8 416 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 GLE1Q53GS7 698 aaKnown RBP13.78□□□□□ -0.2
CSMD1-207ENST00000520451 CT45A2Q5DJT8 189 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 PLXDC2Q6UX71 529 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 PAMR1Q6UXH9 720 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 NPSR1Q6W5P4 371 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 LARP4Q71RC2 724 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSMD1-207ENST00000520451 CTAGE4Q8IX94 777 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 C16orf78Q8WTQ4 265 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 INTS12Q96CB8 462 aaKnown RBP13.78□□□□□ -0.2
CSMD1-207ENST00000520451 DTNBP1Q96EV8 351 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 APIPQ96GX9 242 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 VSTM2LQ96N03 204 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 ZFP3Q96NJ6 502 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 ALPK1Q96QP1 1244 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 TM9SF2Q99805 663 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 SFXN3Q9BWM7 321 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 RBM24Q9BX46 236 aaKnown RBP13.78□□□□□ -0.2
CSMD1-207ENST00000520451 EBPLQ9BY08 206 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 FOLH1BQ9HBA9 442 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 SENP1Q9P0U3 644 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 DKKL1Q9UK85 242 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 STK38LQ9Y2H1 464 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 DOCK7Q96N67 2140 aa13.78□□□□□ -0.2
CSMD1-207ENST00000520451 TSPAN2O60636 221 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 RCBTB2O95199 551 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 ENO1P06733 434 aaKnown RBP13.77□□□□□ -0.21
CSMD1-207ENST00000520451 IMPDH1P20839 514 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 TCEA1P23193 301 aaKnown RBP13.77□□□□□ -0.21
CSMD1-207ENST00000520451 CPA2P48052 419 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 LHX2P50458 406 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 PRKAA2P54646 552 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 BTKQ06187 659 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 LCP2Q13094 533 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 OR5M10Q6IEU7 315 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 AAGABQ6PD74 315 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 ADGRE4PQ86SQ3 457 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 LUZP2Q86TE4 346 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 LCA5Q86VQ0 697 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 SLC22A9Q8IVM8 553 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 SLC44A2Q8IWA5 706 aaPredicted RBP13.77□□□□□ -0.21
CSMD1-207ENST00000520451 FAM9CQ8IZT9 166 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 GCNT2Q8N0V5 402 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 WNT2BQ93097 391 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 SFXN2Q96NB2 322 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 KCNA7Q96RP8 456 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 YIPF4Q9BSR8 244 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 G6PC3Q9BUM1 346 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 SLC35C2Q9NQQ7 365 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 NFU1Q9UMS0 254 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 TIMM22Q9Y584 194 aa13.77□□□□□ -0.21
CSMD1-207ENST00000520451 CCDC151A5D8V7 595 aa13.76□□□□□ -0.21
CSMD1-207ENST00000520451 GOLGA8RI6L899 631 aa13.76□□□□□ -0.21
CSMD1-207ENST00000520451 PLOD2O00469 737 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms