RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 CCT3P49368 545 aaKnown RBP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 XKP51811 444 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 NCBP2P52298 156 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 PDX1P52945 283 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 ITGA1P56199 1179 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 ID2Q02363 134 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 FOLH1Q04609 750 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 EEF1A2Q05639 463 aaKnown RBP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 HSPB3Q12988 150 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 LTB4RQ15722 352 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 CSRP2Q16527 193 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 SYT16Q17RD7 645 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 CPZQ66K79 652 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 B3GNT8Q7Z7M8 397 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 RNF130Q86XS8 419 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 NAXDQ8IW45 347 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 ZZZ3Q8IYH5 903 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 MICU2Q8IYU8 434 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 METTL27Q8N6F8 245 aaPredicted RBP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 TRIML2Q8N7C3 387 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 BMPERQ8N8U9 685 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 TTC29Q8NA56 475 aaPredicted RBP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 ADCY4Q8NFM4 1077 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 OR2T12Q8NG77 320 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 OR4K14Q8NGD5 310 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 OR52N2Q8NGI0 321 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 OR51Q1Q8NH59 317 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 OR5AK3PQ8NH89 298 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 PYDC1Q8WXC3 89 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 SLCO4A1Q96BD0 722 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 NEURL3Q96EH8 262 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 FAM120BQ96EK7 910 aaKnown RBP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 MMABQ96EY8 250 aaPredicted RBP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 DUS3LQ96G46 650 aaKnown RBP7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 PEX11GQ96HA9 241 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 PRRX2Q99811 253 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 EDEM2Q9BV94 578 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 SERHL2Q9H4I8 314 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 SYNDIG1Q9H7V2 258 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 S100A14Q9HCY8 104 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 TMEM9BQ9NQ34 198 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 IRAK4Q9NWZ3 460 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 OCIAD1Q9NX40 245 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 NTMQ9P121 344 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 HCN3Q9P1Z3 774 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 PSME2Q9UL46 239 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 ZNF780BQ9Y6R6 833 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 SPACA6W5XKT8 324 aa7.34□□□□□ -1.23
CTHRC1-203ENST00000520337 RIF1Q5UIP0 2472 aaKnown RBP7.34□□□□□ -1.24
CTHRC1-203ENST00000520337 PTPRBP23467 1997 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 MYO15AQ9UKN7 3530 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 RNF103-CHMP3A0A140T963 221 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 SMIM31A0A1B0GVY4 71 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 OR2W5A6NFC9 320 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 AQP12BA6NM10 295 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 C4orf47A7E2U8 309 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 PLOD2O00469 737 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 CTNSO60931 367 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 LRP3O75074 770 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 LDB3O75112 727 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 KRT75O95678 551 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 LYNP07948 512 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 ETFAP13804 333 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 CPMP14384 443 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 PORP16435 677 aaPredicted RBP7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 MPIP34949 423 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 CHI3L1P36222 383 aaPredicted RBP7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 PEX19P40855 299 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 NBL1P41271 181 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 OR1D4P47884 311 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 ARSFP54793 590 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 CASP9P55211 416 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 SESN3P58005 492 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 SKP1P63208 163 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 IGLV3-21P80748 117 aaPredicted RBP7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 RHDQ02161 417 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 ACY1Q03154 408 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 MGAT2Q10469 447 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 TRA2AQ13595 282 aaKnown RBP eCLIP7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 SPIDRQ14159 915 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 ERV3-1Q14264 604 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 PHF19Q5T6S3 580 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 FHL5Q5TD97 284 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 GLYATQ6IB77 296 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 TMEM64Q6YI46 380 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 C6orf120Q7Z4R8 191 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 SPATA24Q86W54 205 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 PROSER1Q86XN7 944 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 AQP12AQ8IXF9 295 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 GPR135Q8IZ08 494 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 SAMD14Q8IZD0 417 aaPredicted RBP7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 ST13P4Q8IZP2 240 aaPredicted RBP7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 LRRC25Q8N386 305 aaPredicted RBP7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 SLC38A9Q8NBW4 561 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 CATSPER1Q8NEC5 780 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 OR7G2Q8NG99 324 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 OR52E4Q8NGH9 312 aa7.33□□□□□ -1.24
CTHRC1-203ENST00000520337 OR9A2Q8NGT5 310 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms