RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 NDUFA9Q16795 377 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 ENTPD8Q5MY95 495 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 MFSD4BQ5TF39 518 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 HEPHL1Q6MZM0 1159 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 ACSM5Q6NUN0 579 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 CDS1Q92903 461 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 TRPV5Q9NQA5 729 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 SEMA4GQ9NTN9 838 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 DBTP11182 482 aaKnown RBP24.1■■□□□ 1.45
COL13A1-213ENST00000520267 SOX18P35713 384 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 RAB15P59190 212 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 ZNF91Q05481 1191 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 OCLNQ16625 522 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 FAM214AQ32MH5 1076 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 KIF18BQ86Y91 864 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 CLIP4Q8N3C7 705 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 SMRP1Q8NCR6 262 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 FLCNQ8NFG4 579 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 FAM3CQ92520 227 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 MS4A4EQ96PG1 132 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 DSN1Q9H410 356 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 CLEC2DQ9UHP7 191 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 SLC13A4Q9UKG4 626 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 MKLN1Q9UL63 735 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 MMP17Q9ULZ9 603 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 HS3ST3A1Q9Y663 406 aa24.1■■□□□ 1.45
COL13A1-213ENST00000520267 METTL15A6NJ78 407 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 DSCR3O14972 297 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 CYP7B1O75881 506 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 TRHRP34981 398 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-213ENST00000520267 GIPRP48546 466 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 HOXC5Q00444 222 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 IFITM3Q01628 133 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 ID2Q02363 134 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 MEDAGQ5VYS4 303 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 CDC73Q6P1J9 531 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 PRSS41Q7RTY9 318 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 PRICKLE2Q7Z3G6 844 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 CAMKVQ8NCB2 501 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 OR52P1PQ8NH57 321 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 DOK4Q8TEW6 326 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 SLC9A6Q92581 669 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 TSSK6Q9BXA6 273 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 KLK4Q9Y5K2 254 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 URADA6NGE7 173 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 H0YGG7 62 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 TLX2O43763 284 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-213ENST00000520267 TNFP01375 233 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 EIF2S1P05198 315 aaKnown RBP24.09■■□□□ 1.45
COL13A1-213ENST00000520267 CKMT1AP12532 417 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 AVPR1BP47901 424 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 PCYT1AP49585 367 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 ARF3P61204 181 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-213ENST00000520267 CDK5Q00535 292 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 ZNF542PQ5EBM4 170 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 TMEM80Q96HE8 168 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 ZFYVE21Q9BQ24 234 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 POLDIP3Q9BY77 421 aaKnown RBP24.09■■□□□ 1.45
COL13A1-213ENST00000520267 PLA2G12AQ9BZM1 189 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 CPNE7Q9UBL6 633 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 RPL36Q9Y3U8 105 aaKnown RBP24.09■■□□□ 1.45
COL13A1-213ENST00000520267 SLC22A7Q9Y694 548 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 BRWD1Q9NSI6 2320 aa24.09■■□□□ 1.45
COL13A1-213ENST00000520267 CELA2BP08218 269 aaPredicted RBP24.08■■□□□ 1.45
COL13A1-213ENST00000520267 CSTF2P33240 577 aaKnown RBP eCLIP24.08■■□□□ 1.45
COL13A1-213ENST00000520267 ZNF404Q494X3 552 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 C19orf48Q6RUI8 117 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 FRRS1Q6ZNA5 592 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 ATCAYQ86WG3 371 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 OR2L13Q8N349 312 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 SLC44A3Q8N4M1 653 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 GPBAR1Q8TDU6 330 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 DIO2Q92813 273 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 EGLN3Q9H6Z9 239 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 NTNG1Q9Y2I2 539 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 LSM2Q9Y333 95 aaKnown RBP24.08■■□□□ 1.45
COL13A1-213ENST00000520267 EYSQ5T1H1 3165 aa24.08■■□□□ 1.45
COL13A1-213ENST00000520267 SHISA7A6NL88 538 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 DUXAA6NLW8 204 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 ARHGAP33O14559 1287 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 CBFA2T3O75081 653 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 IGHV4-34P06331 123 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 TLX1P31314 330 aaPredicted RBP24.08■■□□□ 1.44
COL13A1-213ENST00000520267 NCF4Q15080 339 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 SSX1Q16384 188 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 ABHD13Q7L211 337 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 FAM26EQ8N5C1 309 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 NECTIN4Q96NY8 510 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 ANKHQ9HCJ1 492 aa24.08■■□□□ 1.44
COL13A1-213ENST00000520267 CPMP14384 443 aa24.07■■□□□ 1.44
COL13A1-213ENST00000520267 ALOX12P18054 663 aa24.07■■□□□ 1.44
COL13A1-213ENST00000520267 PRKAR1BP31321 381 aa24.07■■□□□ 1.44
COL13A1-213ENST00000520267 TRAM2Q15035 370 aa24.07■■□□□ 1.44
COL13A1-213ENST00000520267 TRMT12Q53H54 448 aaKnown RBP24.07■■□□□ 1.44
COL13A1-213ENST00000520267 USP53Q70EK8 1073 aa24.07■■□□□ 1.44
COL13A1-213ENST00000520267 SAMD14Q8IZD0 417 aaPredicted RBP24.07■■□□□ 1.44
COL13A1-213ENST00000520267 SLC34A3Q8N130 599 aa24.07■■□□□ 1.44
COL13A1-213ENST00000520267 OPALINQ96PE5 141 aa24.07■■□□□ 1.44
COL13A1-213ENST00000520267 FAM170BA6NMN3 283 aa24.07■■□□□ 1.44
COL13A1-213ENST00000520267 C2orf74A8MZ97 194 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms