RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 OR4F17Q8NGA8 305 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 OR52M1Q8NGK5 317 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 NPRL2Q8WTW4 380 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 RLN3Q8WXF3 142 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 SLC45A3Q96JT2 553 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 POM121L2Q96KW2 1035 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 OR4F4Q96R69 305 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 TMEM117Q9H0C3 514 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 LIME1Q9H400 295 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 DCAF13Q9NV06 445 aaKnown RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 C1orf123Q9NWV4 160 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 DUS2Q9NX74 493 aaKnown RBP4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 GALPQ9UBC7 116 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 FBXO7Q9Y3I1 522 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 IKBKGQ9Y6K9 419 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 KDRP35968 1356 aa4.36□□□□□ -1.71
HMGB1P46-201ENST00000520062 PPIAL4CA0A0B4J2A2 164 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 ASB14A6NK59 587 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 CTAGE5O15320 804 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 PRAMEF12O95522 483 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 NUDT14O95848 222 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 IGKV3-20P01619 116 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 HOXB7P09629 217 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 PPIAL4GP0DN37 164 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 DLSTP36957 453 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 SLC1A4P43007 532 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 RAG2P55895 527 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 HAND2P61296 217 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 OSTNP61366 133 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 ZNF85Q03923 595 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 GPM6BQ13491 265 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 TFDP1Q14186 410 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 EIF2B1Q14232 305 aaKnown RBP4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 CCL14Q16627 93 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 FAAP20Q6NZ36 180 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 ZNF613Q6PF04 617 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 HACD2Q6Y1H2 254 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 Q7L0L9 218 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 RPAINQ86UA6 219 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 Q8NBF4 154 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 STEAP2Q8NFT2 490 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 UPRTQ96BW1 309 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 WBP1Q96G27 269 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 ELMO2Q96JJ3 720 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 MYCBPQ99417 103 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 SLC30A2Q9BRI3 323 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 FEM1AQ9BSK4 669 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 ALG12Q9BV10 488 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 TBC1D10AQ9BXI6 508 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 IL1RL2Q9HB29 575 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 TAS2R16Q9NYV7 291 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 NUDT4Q9NZJ9 180 aa4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 EXOSC1Q9Y3B2 195 aaKnown RBP4.35□□□□□ -1.71
HMGB1P46-201ENST00000520062 GSAPA4D1B5 854 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 MFSD2BA6NFX1 497 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 PPIAL4DF5H284 164 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 MPHOSPH10O00566 681 aaKnown RBP4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 TM9SF1O15321 606 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 LINC01565O15544 149 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 UFL1O94874 794 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 MBD3O95983 291 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 OPN1MWP04001 364 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 SNRPCP09234 159 aaKnown RBP4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 IQCF3P0C7M6 154 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 RNF224P0DH78 156 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 OPN1MW2P0DN77 364 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 OPN1MW3P0DN78 364 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 RPA2P15927 270 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 H2AFXP16104 143 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 ATP6V1C1P21283 382 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 GLRA2P23416 452 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 SPRP35270 261 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 STK19P49842 368 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 EMDP50402 254 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 ATP12AP54707 1039 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 HILS1P60008 231 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 ACTR1AP61163 376 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 CHIT1Q13231 466 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 SIX1Q15475 284 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 C2CD6Q53TS8 623 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 PRR5LQ6MZQ0 368 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 FAM133AQ8N9E0 248 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 OR52J3Q8NH60 311 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 FLVCR1-AS1Q8TAF5 88 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 NTNG2Q96CW9 530 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 AKR1E2Q96JD6 320 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 SENP8Q96LD8 212 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 TRIM51Q9BSJ1 452 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 SYT11Q9BT88 431 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 ZSCAN5AQ9BUG6 496 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 GSDMCQ9BYG8 508 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 TUBB1Q9H4B7 451 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 SCRT2Q9NQ03 307 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 TXLNGQ9NUQ3 528 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 CPQQ9Y646 472 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 KIF16BQ96L93 1317 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 SALL1Q9NSC2 1324 aa4.34□□□□□ -1.71
HMGB1P46-201ENST00000520062 GRIN2DO15399 1336 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 MBLAC1A4D2B0 266 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms