RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 C11orf54Q9H0W9 315 aaPredicted RBP10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 OSGEPL1Q9H4B0 414 aa10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 MRPS30Q9NP92 439 aaKnown RBP10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 KRCC1Q9NPI7 259 aaPredicted RBP10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 MED17Q9NVC6 651 aa10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 COMMD3Q9UBI1 195 aa10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 DPP7Q9UHL4 492 aa10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 GPR52Q9Y2T5 361 aa10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 SF3B6Q9Y3B4 125 aaKnown RBP10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 PTPRSQ13332 1948 aa10.66□□□□□ -0.7
NUDCD1-203ENST00000519607 FAM25AB3EWG3 89 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 FAM25CB3EWG5 89 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 FAM25GB3EWG6 89 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 PCDH8O95206 1070 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 EPPINO95925 133 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 PRKAR1AP10644 381 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 SLC2A2P11168 524 aaPredicted RBP10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 CTNNB1P35222 781 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 STAT5AP42229 794 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 INPP1P49441 399 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 MAN2A2P49641 1150 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 ZNF628Q5EBL2 1059 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 CD200R1LQ6Q8B3 271 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 ZNF793Q6ZN11 406 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 C16orf62Q7Z3J2 963 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 KLHL36Q8N4N3 616 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 LINC01555Q8NAE3 123 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 ATP6V1C2Q8NEY4 427 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 SMG7Q92540 1137 aaKnown RBP10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 TM9SF4Q92544 642 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 DMRTB1Q96MA1 342 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 LRRC3BQ96PB8 259 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 NRTNQ99748 197 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 TM9SF2Q99805 663 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 LGR4Q9BXB1 951 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 ZNF780BQ9Y6R6 833 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 TBC1D3BA6NDS4 549 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 IGLON5A6NGN9 336 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 DUXAA6NLW8 204 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 B4DXG7 233 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 APOL3O95236 402 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 GAAP10253 952 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 EPCAMP16422 314 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 CPN2P22792 545 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 AHRP35869 848 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 SLC1A3P43003 542 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 TSFMP43897 325 aaKnown RBP10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 GAS1P54826 345 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 ABATP80404 500 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 FABP5Q01469 135 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 C6orf183Q5T699 404 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 TMEM107Q6UX40 140 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 PRICKLE2Q7Z3G6 844 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 HMGN2P46Q86SG4 172 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 Q8N402 240 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 ACOT4Q8N9L9 421 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 POGLUT1Q8NBL1 392 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 TP53I13Q8NBR0 393 aaPredicted RBP10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 PSD4Q8NDX1 1056 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 OR2L5Q8NG80 312 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 OR2A1Q8NGT9 310 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 UBASH3BQ8TF42 649 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 SLC7A6Q92536 515 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 FAM46AQ96IP4 442 aaKnown RBP10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 OR7D2Q96RA2 312 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 ARHGDIGQ99819 225 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 WDR26Q9H7D7 661 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 IMP3Q9NV31 184 aaKnown RBP10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 NLGN3Q9NZ94 848 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 YARS2Q9Y2Z4 477 aaKnown RBP10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 PCDHGB7Q9Y5F8 929 aa10.65□□□□□ -0.7
NUDCD1-203ENST00000519607 CPSF4LA6NMK7 179 aaKnown RBP10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 PROM1O43490 865 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 HMGN1P05114 100 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 LIMS3P0CW19 117 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 LIMS4P0CW20 117 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 ITGB8P26012 769 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 HLA-DMAP28067 261 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 ACSM1Q08AH1 577 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 DMPKQ09013 629 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 MESP2Q0VG99 397 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 FUT5Q11128 374 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 ZIC1Q15915 447 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 DECR1Q16698 335 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 WSCD2Q2TBF2 565 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 CLEC12AQ5QGZ9 265 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 THOC7Q6I9Y2 204 aaKnown RBP10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 ABHD17CQ6PCB6 329 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 OLIG3Q7RTU3 272 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 LHFPL3Q86UP9 236 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 NOXA1Q86UR1 476 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 NUP43Q8NFH3 380 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 TOR1AIP2Q8NFQ8 470 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 OR2L8Q8NGY9 312 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 OR8K5Q8NH50 307 aa10.64□□□□□ -0.71
NUDCD1-203ENST00000519607 NEIL3Q8TAT5 605 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms