RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CSAG2Q9Y5P2 127 aa9.13□□□□□ -0.95
CLN8-202ENST00000517514 PCNX3Q9H6A9 2034 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 EPG5Q9HCE0 2579 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 CLIC1O00299 241 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 HMGN4O00479 90 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 TSPAN2O60636 221 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 TNFRSF21O75509 655 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 ITGA10O75578 1167 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 OR6B1O95007 311 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 ITGB2P05107 769 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 BMP2P12643 396 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 ETFAP13804 333 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 GPX2P18283 190 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 MATN1P21941 496 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 SLC6A2P23975 617 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 GABRA3P34903 492 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 CD97P48960 835 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 POLE2P56282 527 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 ZNF155Q12901 538 aaPredicted RBP9.12□□□□□ -0.95
CLN8-202ENST00000517514 STX5Q13190 355 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 MFAP5Q13361 173 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 RGNQ15493 299 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 ADRM1Q16186 407 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 ZNF791Q3KP31 576 aaPredicted RBP9.12□□□□□ -0.95
CLN8-202ENST00000517514 RABL3Q5HYI8 236 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 CRB2Q5IJ48 1285 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLN8-202ENST00000517514 TNFAIP8L2Q6P589 184 aaPredicted RBP9.12□□□□□ -0.95
CLN8-202ENST00000517514 ZCCHC12Q6PEW1 402 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 HACD2Q6Y1H2 254 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 SZRD1Q7Z422 152 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 SLC44A2Q8IWA5 706 aaPredicted RBP9.12□□□□□ -0.95
CLN8-202ENST00000517514 PRR22Q8IZ63 422 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 LGI4Q8N135 537 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 BEST3Q8N1M1 668 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 EXD3Q8N9H8 876 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 CDRT4Q8N9R6 151 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 OR52N2Q8NGI0 321 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 SLC9A6Q92581 669 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 CDS1Q92903 461 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 RAB8BQ92930 207 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 TMEM125Q96AQ2 219 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 CMTM5Q96DZ9 223 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 NSL1Q96IY1 281 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 SMAD5Q99717 465 aaKnown RBP9.12□□□□□ -0.95
CLN8-202ENST00000517514 RSPO3Q9BXY4 272 aaPredicted RBP9.12□□□□□ -0.95
CLN8-202ENST00000517514 OR51I1Q9H343 314 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLN8-202ENST00000517514 CMTM6Q9NX76 183 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 PLA2G3Q9NZ20 509 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 USP22Q9UPT9 525 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 IGSF10Q6WRI0 2623 aa9.12□□□□□ -0.95
CLN8-202ENST00000517514 NCKAP5O14513 1909 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 ANP32DO95626 131 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 WDPCPO95876 746 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 F10P00742 488 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 NPPAP01160 153 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 ALPPP05187 535 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 OR12D1P0DN82 309 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 ABCD3P28288 659 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 TRHRP34981 398 aaPredicted RBP9.11□□□□□ -0.95
CLN8-202ENST00000517514 CHI3L1P36222 383 aaPredicted RBP9.11□□□□□ -0.95
CLN8-202ENST00000517514 PIGAP37287 484 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 SOX3P41225 446 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 PRIM2P49643 509 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 NUDT2P50583 147 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 MTPNP58546 118 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 DCAF7P61962 342 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 MMEL1Q495T6 779 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 CCNJQ5T5M9 372 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 AP1ARQ63HQ0 302 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 HEPHL1Q6MZM0 1159 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 ISLR2Q6UXK2 745 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 LINC00696Q6ZRV3 163 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 CALHM3Q86XJ0 350 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 PTOV1Q86YD1 416 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 SLC15A3Q8IY34 581 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 SLC5A8Q8N695 610 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 TRIML2Q8N7C3 387 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 BCORP1Q8N888 145 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 CHDHQ8NE62 594 aaPredicted RBP9.11□□□□□ -0.95
CLN8-202ENST00000517514 OR5L2Q8NGL0 311 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 DNAJB8Q8NHS0 232 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 RNF138Q8WVD3 245 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 HGDQ93099 445 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 TMBIM1Q969X1 311 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 ROPN1LQ96C74 230 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 SLC7A6OSQ96CW6 309 aaPredicted RBP9.11□□□□□ -0.95
CLN8-202ENST00000517514 OMA1Q96E52 524 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 HSPBAP1Q96EW2 488 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 ABHD17AQ96GS6 310 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 ZNF354BQ96LW1 612 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 SIGLEC12Q96PQ1 595 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 STACQ99469 402 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 PIGUQ9H490 435 aa9.11□□□□□ -0.95
CLN8-202ENST00000517514 KAT8Q9H7Z6 458 aaKnown RBP9.11□□□□□ -0.95
CLN8-202ENST00000517514 TRIM45Q9H8W5 580 aaPredicted RBP9.11□□□□□ -0.95
CLN8-202ENST00000517514 EFCAB1Q9HAE3 211 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms