RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CD5LO43866 347 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 TNFSF13O75888 250 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 AKAP3O75969 853 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 TOMM70O94826 608 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 CLSTN1O94985 981 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 AKR7A3O95154 331 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 PNMA6AP0CW24 399 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 PTBP1P26599 531 aaKnown RBP eCLIP-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 GP5P40197 560 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 PBX3P40426 434 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 CXCL5P42830 114 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 EIF3BP55884 814 aaKnown RBP-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 OLR1P78380 273 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 MAPK11Q15759 364 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 LRRC36Q1X8D7 754 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 HKDC1Q2TB90 917 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 CASC10Q5T4H9 136 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 APOOLQ6UXV4 268 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 CHST9Q7L1S5 443 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 COX8CQ7Z4L0 72 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 PIGWQ7Z7B1 504 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 FAM71AQ8IYT1 594 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 ESX1Q8N693 406 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 TMEM252Q8N6L7 170 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 FRMD1Q8N878 549 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 FBXL13Q8NEE6 735 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 CMTM2Q8TAZ6 248 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 TTC17Q96AE7 1141 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 INTS12Q96CB8 462 aaKnown RBP-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 MINDY3Q9H8M7 445 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 PPP1R14DQ9NXH3 145 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 OR12D3Q9UGF7 316 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 TRAPPC4Q9Y296 219 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 C22orf24Q9Y442 160 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 CMAHPQ9Y471 501 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 MPDZO75970 2070 aa-1.9□□□□□ -2.71
RNU6-539P-201ENST00000516665 RGS12O14924 1447 aa-1.91□□□□□ -2.71
RNU6-539P-201ENST00000516665 IGKV1OR2-108A0A075B7D4 117 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 A0A1W2PP18 115 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 ARHGEF35A5YM69 484 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 SGK1O00141 431 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 TAPBPO15533 448 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 P2RX6O15547 441 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 ATP6AP2O75787 350 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 GRAP2O75791 330 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 HPDP32754 393 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 SHMT2P34897 504 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 PSMC2P35998 433 aaKnown RBP-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 MAGEA6P43360 314 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 INPP1P49441 399 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 CSNK1EP49674 416 aaKnown RBP-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 RPL32P62910 135 aaKnown RBP-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 PLCXD2Q0VAA5 305 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 TSC22D1Q15714 1073 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 NPTX1Q15818 432 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 PKN2Q16513 984 aaKnown RBP-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 STUMQ69YW2 141 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 MFSD12Q6NUT3 480 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 TEX38Q6PEX7 206 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF730Q6ZMV8 503 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLC43A2Q8N370 569 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 NPBQ8NG41 125 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 OR52I1Q8NGK6 324 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 C8orf46Q8TAG6 207 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 MUC7Q8TAX7 377 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 PNPLA2Q96AD5 504 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 RAB7BQ96AH8 199 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 SPDL1Q96EA4 605 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 C16orf58Q96GQ5 468 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 SGCZQ96LD1 299 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 SFXN2Q96NB2 322 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 C20orf166-AS1Q96NR2 134 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 NR1H4Q96RI1 486 aaPredicted RBP-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 PITX2Q99697 317 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 PLK3Q9H4B4 646 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 NEK6Q9HC98 313 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 SMC4Q9NTJ3 1288 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 DEC1Q9P2X7 70 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 TRPC4Q9UBN4 977 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 EIF3KQ9UBQ5 218 aaKnown RBP-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 THADAQ6YHU6 1953 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 ARFGEF3Q5TH69 2177 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 USH2AO75445 5202 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 PTPRTO14522 1441 aa-1.91□□□□□ -2.72
RNU6-539P-201ENST00000516665 PRAMEF11O60813 436 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZWINTO95229 277 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 NUDT14O95848 222 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 CCNE2O96020 404 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 STSP08842 583 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 GPC3P51654 580 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 RPL27P61353 136 aaKnown RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 GALK2Q01415 458 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 PRPF4BQ13523 1007 aaKnown RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 RASA2Q15283 850 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 KRT31Q15323 416 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 AANATQ16613 207 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLC5A12Q1EHB4 618 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 CYP20A1Q6UW02 462 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMCO3Q6UWJ1 677 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 SPINK6Q6UWN8 80 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms