RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 CACUL1Q86Y37 369 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 CCDC83Q8IWF9 413 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 SYCP3Q8IZU3 236 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 CLYBLQ8N0X4 340 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 THEM5Q8N1Q8 247 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 CSNK1G2-AS1Q8NCQ2 148 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 GANCQ8TET4 914 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 ULK4Q96C45 1275 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 AP2M1Q96CW1 435 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 ERGIC2Q96RQ1 377 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 MARCH7Q9H992 704 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 DNAJC17Q9NVM6 304 aaKnown RBP4.42□□□□□ -1.7
LINC01088-208ENST00000511895 PLEK2Q9NYT0 353 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 CPQQ9Y646 472 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 SYNRGQ9UMZ2 1314 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 SPEF2Q9C093 1822 aa4.42□□□□□ -1.7
LINC01088-208ENST00000511895 IGHV3-16A0A0C4DH30 117 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 A4D1N5 150 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 H0Y626 953 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 H0YIG0 161 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 SYT7O43581 403 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 OR6B1O95007 311 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 ODC1P11926 461 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 BCL3P20749 454 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 PPP2R1AP30153 589 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 SPRP35270 261 aaPredicted RBP4.41□□□□□ -1.7
LINC01088-208ENST00000511895 SLC1A6P48664 564 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 HMGCS2P54868 508 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 CCNA1P78396 465 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 ROR1Q01973 937 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 CCDC152Q4G0S7 254 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 SNRNP48Q6IEG0 339 aaKnown RBP4.41□□□□□ -1.7
LINC01088-208ENST00000511895 LINC00612Q8N6U2 182 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 ZBTB44Q8NCP5 570 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 CCDC197Q8NCU1 140 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 RHOXF1Q8NHV9 184 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 FAM151AQ8WW52 585 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 JAKMIP1Q96N16 626 aaKnown RBP4.41□□□□□ -1.7
LINC01088-208ENST00000511895 RUNDC3BQ96NL0 473 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 FAM212BQ9NTI7 297 aaPredicted RBP4.41□□□□□ -1.7
LINC01088-208ENST00000511895 ANKMY1Q9P2S6 941 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 DOCK2Q92608 1830 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 TANC1Q9C0D5 1861 aa4.41□□□□□ -1.7
LINC01088-208ENST00000511895 ATRQ13535 2644 aa4.4□□□□□ -1.7
LINC01088-208ENST00000511895 C13orf42A0A1B0GVH6 325 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 A0A1W2PRQ8 180 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 E9PAM4 449 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 CHUKO15111 745 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 TTI1O43156 1089 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 HTATSF1O43719 755 aaKnown RBP4.4□□□□□ -1.71
LINC01088-208ENST00000511895 ASGR1P07306 291 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 RETP07949 1114 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 FHITP49789 147 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 DEFB103AP81534 67 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 NFE2L1Q14494 772 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 NHLRC1Q6VVB1 395 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 COPS6Q7L5N1 327 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 SIAH3Q8IW03 269 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 SNRNP40Q96DI7 357 aaKnown RBP4.4□□□□□ -1.71
LINC01088-208ENST00000511895 C1orf147Q96MC9 270 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-208ENST00000511895 ABCB8Q9NUT2 735 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 FAM120CQ9NX05 1096 aaKnown RBP4.4□□□□□ -1.71
LINC01088-208ENST00000511895 LEF1Q9UJU2 399 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-208ENST00000511895 OR1A2Q9Y585 309 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 KIAA1217Q5T5P2 1943 aa4.4□□□□□ -1.71
LINC01088-208ENST00000511895 CACNA1DQ01668 2161 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 IGLV3-10A0A075B6K4 115 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 TEX48A0A1B0GUV7 120 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 BCLAF3A2AJT9 711 aaKnown RBP4.39□□□□□ -1.71
LINC01088-208ENST00000511895 GTPBP10A4D1E9 387 aaKnown RBP4.39□□□□□ -1.71
LINC01088-208ENST00000511895 FAM149AA5PLN7 773 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 ZNF840PA6NDX5 716 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 CSO75390 466 aaKnown RBP4.39□□□□□ -1.71
LINC01088-208ENST00000511895 PRDM1O75626 825 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 RENP00797 406 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 IGHG1P01857 330 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 HMOX1P09601 288 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 SERPINB6P35237 376 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 KRT2P35908 639 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 TNNT3P45378 269 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-208ENST00000511895 NOVA1P51513 510 aaKnown RBP4.39□□□□□ -1.71
LINC01088-208ENST00000511895 KRTAP10-3P60369 221 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 SPP2Q13103 211 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 RPS6KA1Q15418 735 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 KBTBD12Q3ZCT8 623 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 ZNF506Q5JVG8 444 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 Q6ZR54 194 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 NUFIP2Q7Z417 695 aaKnown RBP4.39□□□□□ -1.71
LINC01088-208ENST00000511895 MARCH9Q86YJ5 346 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 LRRC49Q8IUZ0 686 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 CLEC1AQ8NC01 280 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 GDAP1Q8TB36 358 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 KIAA1524Q8TCG1 905 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 ZPLD1Q8TCW7 415 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 GGHQ92820 318 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 PANX3Q96QZ0 392 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 RAB23Q9ULC3 237 aa4.39□□□□□ -1.71
LINC01088-208ENST00000511895 BARX2Q9UMQ3 279 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-208ENST00000511895 UTP20O75691 2785 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms