RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CAPZBP47756 277 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 BTG2P78543 158 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 PROX2Q3B8N5 592 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 ZNF770Q6IQ21 691 aaPredicted RBP13.91□□□□□ -0.18
PHF3-209ENST00000509330 FAR1Q8WVX9 515 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 ZFPM2Q8WW38 1151 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 RASSF5Q8WWW0 418 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 FUNDC2Q9BWH2 189 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 A0A0G2JPF8 293 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 A0A1B0GVT2 93 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 FAM221BA6H8Z2 402 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 HNRNPCL2B2RXH8 293 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 HNRNPCL3B7ZW38 293 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 PEX12O00623 359 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 GKN3PP0CG01 181 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 HNRNPCL4P0DMR1 293 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 MLLT3P42568 568 aaPredicted RBP13.91□□□□□ -0.18
PHF3-209ENST00000509330 ARFIP1P53367 373 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 OR1D5P58170 312 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 GABARAPL2P60520 117 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 MAP4K2Q12851 820 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 ZNF628Q5EBL2 1059 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 CWF19L1Q69YN2 538 aaKnown RBP13.91□□□□□ -0.18
PHF3-209ENST00000509330 PGBD2Q6P3X8 592 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 FRRS1Q6ZNA5 592 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 OR4K5Q8NGD3 323 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 RORBQ92753 470 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 MOAP1Q96BY2 351 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 MMABQ96EY8 250 aaPredicted RBP13.91□□□□□ -0.18
PHF3-209ENST00000509330 COPS4Q9BT78 406 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 MS4A12Q9NXJ0 267 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 CNIH4Q9P003 139 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 IL20RAQ9UHF4 553 aa13.91□□□□□ -0.18
PHF3-209ENST00000509330 GXYLT2A0PJZ3 443 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 GPR75O95800 540 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 MAOAP21397 527 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 PGDP52209 483 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 HMGA2P52926 109 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 CRISP1P54107 249 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 UGT2B15P54855 530 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 RGS8P57771 180 aaPredicted RBP13.9□□□□□ -0.18
PHF3-209ENST00000509330 ALDH6A1Q02252 535 aaKnown RBP13.9□□□□□ -0.18
PHF3-209ENST00000509330 DBPQ10586 325 aaPredicted RBP13.9□□□□□ -0.18
PHF3-209ENST00000509330 GTF2IRD2BQ6EKJ0 949 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 CDC73Q6P1J9 531 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 GTF2IRD2Q86UP8 949 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 OR2L13Q8N349 312 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 UCK2Q9BZX2 261 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 SPRTNQ9H040 489 aaPredicted RBP13.9□□□□□ -0.18
PHF3-209ENST00000509330 POLR2J3Q9H1A7 115 aaKnown RBP13.9□□□□□ -0.18
PHF3-209ENST00000509330 MAN2C1Q9NTJ4 1040 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 TMEM9Q9P0T7 183 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 A0A1B0GVG6 124 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 RHPN2P1A8MT19 583 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 SEC14L2O76054 403 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 DCKP27707 260 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 TGFBR1P36897 503 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 MLLT10P55197 1068 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 MAPK14Q16539 360 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 PTCHD4Q6ZW05 846 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 COX18Q8N8Q8 333 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 SPATA5L1Q9BVQ7 753 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 BCL2L10Q9HD36 194 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 DNAJC27Q9NZQ0 273 aa13.9□□□□□ -0.18
PHF3-209ENST00000509330 TMEM184BQ9Y519 407 aaPredicted RBP13.9□□□□□ -0.18
PHF3-209ENST00000509330 TMEM265A0A087WTH1 108 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 ZNF99A8MXY4 864 aaPredicted RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 TGFBR3LH3BV60 316 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 PDGFBP01127 241 aaPredicted RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 STSP08842 583 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 ALAS2P22557 587 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 MMP11P24347 488 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 SSTR4P31391 388 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 GABRA3P34903 492 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 C21orf59P57076 290 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 NUP107P57740 925 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 STARD6P59095 220 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 ZNF155Q12901 538 aaPredicted RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 ZER1Q7Z7L7 766 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 ZAR1Q86SH2 424 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 OR4N2Q8NGD1 307 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 OR52R1Q8NGF1 315 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 ANKRD9Q96BM1 317 aaPredicted RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 THAP11Q96EK4 314 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 AHCYL2Q96HN2 611 aaKnown RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 GUCD1Q96NT3 240 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 TWSG1Q9GZX9 223 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 DUSP21Q9H596 190 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 MAT2BQ9NZL9 334 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 LRIT1Q9P2V4 623 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 NDOR1Q9UHB4 597 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 SH3PXD2BA1X283 911 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 BCAS1O75363 584 aaPredicted RBP13.89□□□□□ -0.19
PHF3-209ENST00000509330 CCNYL3P0C7X3 344 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 NXPH1P58417 271 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 STX4Q12846 297 aa13.89□□□□□ -0.19
PHF3-209ENST00000509330 GNA13Q14344 377 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms