RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ZBTB18Q99592 522 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 GCOM2Q9BZD3 368 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 VPS37BQ9H9H4 285 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 RABL2AQ9UBK7 228 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 RNF14Q9UBS8 474 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 FZR1Q9UM11 496 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 CLEC4AQ9UMR7 237 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 SPATA31D1Q6ZQQ2 1576 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 ZMYM6O95789 1325 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 AFF2P51816 1311 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 CUX2O14529 1486 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 TTC26A0AVF1 554 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 PCP4L1A6NKN8 68 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 LMO7DNF2Z398 122 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 K7ERI5 159 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 INPP4BO15327 924 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 JAK2O60674 1132 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 SPAG6O75602 509 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 IGKV3-15P01624 115 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 FCER2P06734 321 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 TOP1P11387 765 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 CYP11B1P15538 503 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 CALB2P22676 271 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 GPR183P32249 361 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 CAPGP40121 348 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 PEX3P56589 373 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 PPIAP62937 165 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 DHODHQ02127 395 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 MFGE8Q08431 387 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 FUT7Q11130 342 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 MRPL28Q13084 256 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 SRSF9Q13242 221 aaKnown RBP eCLIP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 HKDC1Q2TB90 917 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 DCAF4L1Q3SXM0 396 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 SPATA46Q5T0L3 261 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 Q7L0L9 218 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 RANBP3LQ86VV4 465 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 CBWD2Q8IUF1 395 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 TBC1D10CQ8IV04 446 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 DND1Q8IYX4 353 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLC22A15Q8IZD6 547 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLC39A11Q8N1S5 342 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZCCHC7Q8N3Z6 543 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR9Q2Q8NGE9 314 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 TRMT10AQ8TBZ6 339 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 MIPOL1Q8TD10 442 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 ATP8B4Q8TF62 1192 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 LRRC15Q8TF66 581 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 LIPHQ8WWY8 451 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 PNPLA2Q96AD5 504 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 TADA1Q96BN2 335 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 CNDP1Q96KN2 507 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 RPP25Q9BUL9 199 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 MRPL13Q9BYD1 178 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 LRRCC1Q9C099 1032 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 HOXD1Q9GZZ0 328 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 CXXC4Q9H2H0 198 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 DHX33Q9H6R0 707 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 PLEKHA3Q9HB20 300 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 LPAR2Q9HBW0 351 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 FANCFQ9NPI8 374 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 TRPV5Q9NQA5 729 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 NLGN3Q9NZ94 848 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 KLK11Q9UBX7 282 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 CHRNA9Q9UGM1 479 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 BAIAP2L1Q9UHR4 511 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 RARRES3Q9UL19 164 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 ARID2Q68CP9 1835 aa3.4□□□□□ -1.87
TRAPPC13-209ENST00000508304 GSAPA4D1B5 854 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 CTAGE15A4D2H0 777 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR5H15A6NDH6 313 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 WASHC1A8K0Z3 465 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 EPM2AB3EWF7 344 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 E9PMD0 336 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 H3BMH7 237 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 SGK494L7N484 410 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 SGK1O00141 431 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 CASKO14936 926 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 MTRF1O75570 445 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 STK17BO94768 372 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 NDUFA7O95182 113 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 ADCY5O95622 1261 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 ANGPTL1O95841 491 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 GDI1P31150 447 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 HTR5AP47898 357 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 NDST1P52848 882 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 METAP1P53582 386 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 AIF1P55008 147 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 GSTO1P78417 241 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 TAB1Q15750 504 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 ECSCRQ19T08 205 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 ANKRD55Q3KP44 614 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 RABGAP1LQ5R372 815 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 ATF7IP2Q5U623 682 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 SCYL2Q6P3W7 929 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 CBLN3Q6UW01 205 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 TAS2R42Q7RTR8 314 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms