RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 A0A0G2JNJ9 132 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 TLDC2A0PJX2 215 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 NKX2-6A6NCS4 301 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 FAM90A27PA6NNH2 459 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 PLOD2O00469 737 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 TSPAN2O60636 221 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 TRIM13O60858 407 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 ICOSLGO75144 302 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 NME6O75414 186 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 ERN1O75460 977 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 SLITRK5O94991 958 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 IFI6P09912 130 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 TACR1P25103 407 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 SSTR2P30874 369 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 MPIP34949 423 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 ZFP36L2P47974 494 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 MASP1P48740 699 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 CORO7P57737 925 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 PSPHP78330 225 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 PSG6Q00889 435 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 C2orf80Q0P641 193 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 ERCC6LQ2NKX8 1250 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 EIPR1Q53HC9 387 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 RIPPLY2Q5TAB7 128 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 KANK2Q63ZY3 851 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 VASNQ6EMK4 673 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 WDR93Q6P2C0 686 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 MEX3BQ6ZN04 569 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 IKBIPQ70UQ0 350 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 LIX1LQ8IVB5 337 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 OR2L13Q8N349 312 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 LIX1Q8N485 282 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 WDSUB1Q8N9V3 476 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 CCDC63Q8NA47 563 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 OR1J4Q8NGS1 313 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 OR2T11Q8NH01 316 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 TMBIM1Q969X1 311 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 EGLN2Q96KS0 407 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 COL21A1Q96P44 957 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 TIMP4Q99727 224 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 OSBPL11Q9BXB4 747 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 ROPN1BQ9BZX4 212 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 ROPN1Q9HAT0 212 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 FOLH1BQ9HBA9 442 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 GALNT9Q9HCQ5 603 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 KCNJ16Q9NPI9 418 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 C1orf109Q9NX04 203 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 Q9UFV3 132 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 C19orf53Q9UNZ5 99 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 POLR3HQ9Y535 204 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 DCHS2Q6V1P9 2916 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 ADGRG4Q8IZF6 3080 aa8.28□□□□□ -1.08
PDLIM5-209ENST00000506632 C15orf38-AP3S2A0A0A6YYH1 394 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 PRAMEF25A6NGN4 478 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 AHRRA9YTQ3 701 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 KDM4EB2RXH2 506 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 FAM47E-STBD1D6RA91 191 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 UPK1AO00322 258 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 SLC28A1O00337 649 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 GNB5O14775 395 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 AZIN1O14977 448 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 NPHS1O60500 1241 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 TBX19O60806 448 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 COQ9O75208 318 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 SEC22BO75396 215 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 CRCPO75575 148 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 REM1O75628 298 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 EPPINO95925 133 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 JUNP05412 331 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 CHRNGP07510 517 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 FGF4P08620 206 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 NEFHP12036 1026 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 BMP7P18075 431 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 SDC1P18827 310 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 ALDH3A1P30838 453 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 CEACAM8P31997 349 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 NCBP2P52298 156 aaKnown RBP eCLIP8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 PNLIPRP2P54317 469 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 GAS1P54826 345 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 UGT3A2Q3SY77 523 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 ACSF3Q4G176 576 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 DCST1Q5T197 706 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 EMBQ6PCB8 327 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 ANGPTL8Q6UXH0 198 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 DMRTC2Q8IXT2 367 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 FAM83FQ8NEG4 500 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 OR10Q1Q8NGQ4 319 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 OR6Y1Q8NGX8 325 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 CDC26Q8NHZ8 85 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 HOXB13Q92826 284 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 CAVIN3Q969G5 261 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 TMCO6Q96DC7 493 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 LURAP1Q96LR2 239 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 AMDHD1Q96NU7 426 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 FAM111AQ96PZ2 611 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 BBS4Q96RK4 519 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 CCT7Q99832 543 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 MECRQ9BV79 373 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 TMEM109Q9BVC6 243 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 UGT2B28Q9BY64 529 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms