RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GIPC3Q8TF64 312 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 LIPHQ8WWY8 451 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 TMEM190Q8WZ59 177 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 MRPL24Q96A35 216 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 RAB7BQ96AH8 199 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 PINX1Q96BK5 328 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 OPTNQ96CV9 577 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 FAM218AQ96MZ4 157 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 KRT12Q99456 494 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 GPA33Q99795 319 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 NDUFAF3Q9BU61 184 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF416Q9BWM5 594 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 TEX13BQ9BXU2 312 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 PUS3Q9BZE2 481 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 COA1Q9GZY4 146 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 CXXC4Q9H2H0 198 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 DCTPP1Q9H773 170 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 COG4Q9H9E3 785 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 KCNK13Q9HB14 408 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 CD209Q9NNX6 404 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 PALMDQ9NP74 551 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 TBK1Q9UHD2 729 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF490Q9ULM2 529 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF175Q9Y473 711 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 MFHAS1Q9Y4C4 1052 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 ANGPTL3Q9Y5C1 460 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 RNF215Q9Y6U7 377 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 MKI67P46013 3256 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 TRPM7Q96QT4 1865 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 SPEF2Q9C093 1822 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 COL1A1P02452 1464 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 RANBP2P49792 3224 aaKnown RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 SZT2Q5T011 3432 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 MYO3BQ8WXR4 1341 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 CCL15-CCL14A0A0B4J2E2 113 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 MEI4A8MW99 385 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 TMCO5BA8MYB1 307 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 HHLA1C9JL84 531 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 NPIPB9F8W1W9 429 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 MPHOSPH10O00566 681 aaKnown RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 PDXKO00764 312 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 SH2D1BO14796 132 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 MAPK13O15264 365 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 CFLARO15519 480 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 TNFSF12O43508 249 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 BUB1O43683 1085 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 TSPAN2O60636 221 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 MFN2O95140 757 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 NXPH2O95156 264 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 APBB3O95704 486 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 PCCBP05166 539 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 KRT8P05787 483 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 FCER2P06734 321 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 GSTA1P08263 222 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 THRBP10828 461 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 GNB3P16520 340 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 PAICSP22234 425 aaKnown RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 IL4RP24394 825 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 EDNRAP25101 427 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 PTPN6P29350 595 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 FCGR2BP31994 310 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 SOX6P35712 828 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZFP36L2P47974 494 aaKnown RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 NDST1P52848 882 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ERVK-16P61578 105 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 RPS4XP62701 263 aaKnown RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 DHODHQ02127 395 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 FUT7Q11130 342 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 KLF5Q13887 457 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 VGLL4Q14135 290 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 CCL15Q16663 113 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZSWIM7Q19AV6 140 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 HLA-BQ31612 363 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ADPRMQ3LIE5 342 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 TMEM41BQ5BJD5 291 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 WLSQ5T9L3 541 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 LRRC8BQ6P9F7 803 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 DPY19L2P2Q6ZN68 376 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ARMCX2Q7L311 632 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ITIH5Q86UX2 942 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 TBC1D10CQ8IV04 446 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR4N5Q8IXE1 308 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 CENPLQ8N0S6 344 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ICA1LQ8NDH6 482 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR6F1Q8NGZ6 308 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 FBXO30Q8TB52 745 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ATP8B4Q8TF62 1192 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 CCDC51Q96ER9 411 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 RBM18Q96H35 190 aaKnown RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 GMPPAQ96IJ6 420 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZBED3Q96IU2 234 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 ACCSQ96QU6 501 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 F2RL3Q96RI0 385 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 NODALQ96S42 347 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 MYCBPQ99417 103 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 TXN2Q99757 166 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 WRAP53Q9BUR4 548 aaKnown RBP2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 RAB11FIP5Q9BXF6 653 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 CLEC7AQ9BXN2 247 aa2.76□□□□□ -1.97
TRAPPC11-205ENST00000506426 TDRD3Q9H7E2 651 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms