RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 DUSP26Q9BV47 211 aa15.33■□□□□ 0.04
SNCA-209ENST00000506244 ZFP64Q9NPA5 681 aa15.33■□□□□ 0.04
SNCA-209ENST00000506244 NTMQ9P121 344 aa15.33■□□□□ 0.04
SNCA-209ENST00000506244 SLC5A6Q9Y289 635 aa15.33■□□□□ 0.04
SNCA-209ENST00000506244 RELNP78509 3460 aa15.33■□□□□ 0.04
SNCA-209ENST00000506244 A0A1B0GUH1 482 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 PINLYPA6NC86 204 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 FAM166BA8MTA8 275 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 EMC8O43402 210 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 CDC40O60508 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNCA-209ENST00000506244 SLC19A2O60779 497 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 REM1O75628 298 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 ABOP16442 354 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 EPHA3P29320 983 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 MASP1P48740 699 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 CDK9P50750 372 aaKnown RBP15.32■□□□□ 0.04
SNCA-209ENST00000506244 PSG6Q00889 435 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 SNTA1Q13424 505 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 DECR1Q16698 335 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 CYP27C1Q4G0S4 372 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 TMEM198Q66K66 360 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 NXNQ6DKJ4 435 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 ARHGAP11AQ6P4F7 1023 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 NPSR1Q6W5P4 371 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 CDRT4Q8N9R6 151 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 NUP43Q8NFH3 380 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 OR56A1Q8NGH5 318 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 TESCQ96BS2 214 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 MOAP1Q96BY2 351 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 SLC35A4Q96G79 324 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 RILPQ96NA2 401 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 OSBPL11Q9BXB4 747 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 ANGPTL4Q9BY76 406 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 ZNF703Q9H7S9 590 aaPredicted RBP15.32■□□□□ 0.04
SNCA-209ENST00000506244 ZDHHC11Q9H8X9 412 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 EQTNQ9NQ60 294 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 AIG1Q9NVV5 245 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 QPCTLQ9NXS2 382 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 TUBA8Q9NY65 449 aaPredicted RBP15.32■□□□□ 0.04
SNCA-209ENST00000506244 KLRF1Q9NZS2 232 aa15.32■□□□□ 0.04
SNCA-209ENST00000506244 UQCRHLA0A096LP55 91 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 PRAMEF25A6NGN4 478 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 KCNH1O95259 989 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 KRT16P08779 473 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 IDO1P14902 403 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 ELAVL4P26378 380 aaKnown RBP15.31■□□□□ 0.04
SNCA-209ENST00000506244 CASP3P42574 277 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 KIR3DL1P43629 444 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 PRIM2P49643 509 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 PNLIPRP2P54317 469 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 FOXO1Q12778 655 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 PGS1Q32NB8 556 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 SPDYE7PQ495Y7 208 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 HSP90B2PQ58FF3 399 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 CMPK2Q5EBM0 449 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 SLC30A6Q6NXT4 461 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 MTFR2Q6P444 385 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 ZCCHC12Q6PEW1 402 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 BHLHB9Q6PI77 547 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 EID3Q8N140 333 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 VPS37AQ8NEZ2 397 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 OR8J2Q8NGG1 315 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 PSMA8Q8TAA3 256 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 SFXN5Q8TD22 340 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 ACTRT2Q8TDY3 377 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 HGDQ93099 445 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 TMEM41AQ96HV5 264 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 MAELQ96JY0 434 aaKnown RBP15.31■□□□□ 0.04
SNCA-209ENST00000506244 JSRP1Q96MG2 331 aaPredicted RBP15.31■□□□□ 0.04
SNCA-209ENST00000506244 ZBTB18Q99592 522 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 ZCCHC3Q9NUD5 404 aaKnown RBP15.31■□□□□ 0.04
SNCA-209ENST00000506244 CBLCQ9ULV8 474 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 SNX8Q9Y5X2 465 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 ZGRF1Q86YA3 2104 aa15.31■□□□□ 0.04
SNCA-209ENST00000506244 GOLGA8QA0A0J9YX86 632 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 GOLGA8OA6NCC3 632 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 E9PBE3 544 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 GOLGA8NF8WBI6 632 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 RNASET2O00584 256 aaKnown RBP15.3■□□□□ 0.04
SNCA-209ENST00000506244 CFLARO15519 480 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 UGT2B11O75310 529 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 TRIM3O75382 744 aaPredicted RBP15.3■□□□□ 0.04
SNCA-209ENST00000506244 SOX30O94993 753 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 TGDSO95455 350 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 MAGEA5P43359 124 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 PRKAG1P54619 331 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 HIVEP3Q5T1R4 2406 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 ANXA8L1Q5VT79 327 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 ACAD11Q709F0 780 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 SPPL2CQ8IUH8 684 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 TMEM251Q8N6I4 163 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 SSC4DQ8WTU2 575 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 FAM120BQ96EK7 910 aaKnown RBP15.3■□□□□ 0.04
SNCA-209ENST00000506244 MAGEB18Q96M61 343 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 ADOQ96SZ5 270 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 WDR55Q9H6Y2 383 aaPredicted RBP15.3■□□□□ 0.04
SNCA-209ENST00000506244 PLSCR2Q9NRY7 297 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 SUCOQ9UBS9 1254 aaKnown RBP15.3■□□□□ 0.04
SNCA-209ENST00000506244 PCDHGB4Q9UN71 923 aa15.3■□□□□ 0.04
SNCA-209ENST00000506244 USH1CQ9Y6N9 552 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms