RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 OR4F6Q8NGB9 312 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 ZNF675Q8TD23 568 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 SLC35A4Q96G79 324 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 ELOVL5Q9NYP7 299 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 CLCF1Q9UBD9 225 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 VPS29Q9UBQ0 182 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 ZNF639Q9UID6 485 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 SLC22A20A6NK97 555 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 COQ9O75208 318 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 TAC1P20366 129 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 S1PR1P21453 382 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 DPP4P27487 766 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 MPIP34949 423 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 KCNJ5P48544 419 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 PNLIPRP2P54317 469 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 DSCR4P56555 118 aaPredicted RBP19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 RPS3AP61247 264 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 CKAP4Q07065 602 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 GANABQ14697 944 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 LGSNQ5TDP6 509 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 FAM111BQ6SJ93 734 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 C20orf204Q6ZNR8 217 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 ADGRE4PQ86SQ3 457 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 CNEP1R1Q8N9A8 125 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 NUDT8Q8WV74 236 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 ZNF592Q92610 1267 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 TMBIM1Q969X1 311 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 CTHRC1Q96CG8 243 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 BTBD9Q96Q07 612 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 MRPL57Q9BQC6 102 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 MRPL46Q9H2W6 279 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 ACSS3Q9H6R3 686 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 PPP4R1LQ9P1A2 415 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 XPR1Q9UBH6 696 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 TRPS1Q9UHF7 1281 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 CES1P1Q9UKY3 287 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 GPR55Q9Y2T6 319 aaPredicted RBP19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 TESMINQ9Y4I5 508 aa19.09■□□□□ 0.65
SQSTM1-210ENST00000506042 GNG14A0A1W2PPG7 69 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 SLITRK5O94991 958 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 FCGR2AP12318 317 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 ZNF708P17019 499 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 CD79BP40259 229 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 PSMD4P55036 377 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 GFRA1P56159 465 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 FOXF2Q12947 444 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 CSTF3Q12996 717 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 TRAF3Q13114 568 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 SPIN4Q56A73 249 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 Q5PR19 223 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 C8orf74Q6P047 294 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 PRSS57Q6UWY2 283 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 LARP4Q71RC2 724 aaKnown RBP eCLIP19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 WDSUB1Q8N9V3 476 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 SIMC1Q8NDZ2 872 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 ADOQ96SZ5 270 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 CCL19Q99731 98 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 EHD3Q9NZN3 535 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 MCM8Q9UJA3 840 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 DTX4Q9Y2E6 619 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 ZFHX3Q15911 3703 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 ABCA2Q9BZC7 2435 aa19.08■□□□□ 0.64
SQSTM1-210ENST00000506042 AKAP6Q13023 2319 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 MPDZO75970 2070 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 A0A1W2PNV4 684 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 A0A1W2PS29 197 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 C2orf72A6NCS6 295 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 CBX7O95931 251 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 GRK2P25098 689 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 HMOX2P30519 316 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 SLCO1A2P46721 670 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 LHX2P50458 406 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 PPP2R2BQ00005 443 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 RASA2Q15283 850 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 ZNHIT3Q15649 155 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 FAM9CQ8IZT9 166 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 C1orf52Q8N6N3 182 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 SLC44A1Q8WWI5 657 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 GFM2Q969S9 779 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 TM4SF18Q96CE8 201 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 GPR78Q96P69 363 aa19.07■□□□□ 0.64
SQSTM1-210ENST00000506042 HCRTR2O43614 444 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 PDYNP01213 254 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 POU2F1P14859 743 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 PCSK2P16519 638 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 MC3RP41968 323 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 EMDP50402 254 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 ACSM2AQ08AH3 577 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 TRMT12Q53H54 448 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 RAET1LQ5VY80 246 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 ACSM2BQ68CK6 577 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 CAVIN3Q969G5 261 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 PGM2Q96G03 612 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 ZNF845Q96IR2 970 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 ABCG2Q9UNQ0 655 aa19.06■□□□□ 0.64
SQSTM1-210ENST00000506042 CTIFO43310 598 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-210ENST00000506042 ULK1O75385 1050 aa19.05■□□□□ 0.64
SQSTM1-210ENST00000506042 PTGDSP41222 190 aa19.05■□□□□ 0.64
SQSTM1-210ENST00000506042 GUCY2DQ02846 1103 aa19.05■□□□□ 0.64
SQSTM1-210ENST00000506042 MGAT2Q10469 447 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms