RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CMTM8Q8IZV2 173 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 CLDN22Q8N7P3 220 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 OR8D4Q8NGM9 314 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 OR8K5Q8NH50 307 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SORCS1Q8WY21 1168 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 NXPE2Q96DL1 559 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 GAL3ST1Q99999 423 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 CHST8Q9H2A9 424 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 OR51V1Q9H2C8 321 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 PIGUQ9H490 435 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 DDX31Q9H8H2 851 aaKnown RBP7.19□□□□□ -1.26
NEDD9-208ENST00000504387 C12orf10Q9HB07 376 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 SDHAF2Q9NX18 166 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 LHX3Q9UBR4 397 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 CACNG2Q9Y698 323 aa7.19□□□□□ -1.26
NEDD9-208ENST00000504387 TEX51A0A1B0GUA7 166 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 RPS10-NUDT3A0A1W2PQS6 291 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ZNF840PA6NDX5 716 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SCAMP1O15126 338 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 PPM1DO15297 605 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ARPC5O15511 151 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 PROM1O43490 865 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ANKRD34CP0C6C1 535 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 LIMS3P0CW19 117 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 LIMS4P0CW20 117 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 C8orf89P0DMQ9 161 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 CPEP16870 476 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 MAGEB1P43366 347 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 BLVRAP53004 296 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ANXA8L1Q5VT79 327 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 BICRALQ6AI39 1079 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 RETSATQ6NUM9 610 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 Q6ZVL8 140 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 KRT78Q8N1N4 520 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 DUSP18Q8NEJ0 188 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 OR10H4Q8NGA5 316 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 OR52N2Q8NGI0 321 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 TMEM163Q8TC26 289 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ASB11Q8WXH4 323 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SOCS4Q8WXH5 440 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 TMEM175Q9BSA9 504 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 AUNIPQ9H7T9 357 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ZDHHC4Q9NPG8 344 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 BAIAP2Q9UQB8 552 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SIRT4Q9Y6E7 314 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-208ENST00000504387 OR6C74A6NCV1 312 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ANKRD61A6NGH8 418 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 LINC01387J3KSC0 135 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 PSMD9O00233 223 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 GPR171O14626 319 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ERAL1O75616 437 aaKnown RBP7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SOD1P00441 154 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 GYPBP06028 91 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 TPOP07202 933 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 FAM157BP0CG42 384 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 GNSP15586 552 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 TIA1P31483 386 aaKnown RBP eCLIP7.18□□□□□ -1.26
NEDD9-208ENST00000504387 RECQLP46063 649 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-208ENST00000504387 HCCSP53701 268 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 CLDN12P56749 244 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 HSF2Q03933 536 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 GPR17Q13304 367 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ANGPT1Q15389 498 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ZNF750Q32MQ0 723 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 CST9Q5W186 159 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 TIGD3Q6B0B8 471 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 REEP3Q6NUK4 255 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 TMEM88Q6PEY1 159 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 CRTC1Q6UUV9 634 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 NHLRC1Q6VVB1 395 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 Q6ZTK2 550 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 ADGRF3Q8IZF5 1079 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 FAM9CQ8IZT9 166 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 OR51L1Q8NGJ5 315 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SGTBQ96EQ0 304 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 GPR137Q96N19 417 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 HTATIP2Q9BUP3 242 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SEMA4CQ9C0C4 833 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 PPA2Q9H2U2 334 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 TTYH1Q9H313 450 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-208ENST00000504387 REEP4Q9H6H4 257 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 RC3H2Q9HBD1 1191 aaKnown RBP7.18□□□□□ -1.26
NEDD9-208ENST00000504387 KCMF1Q9P0J7 381 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 BTNL2Q9UIR0 455 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 STOML2Q9UJZ1 356 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 MAB21L2Q9Y586 359 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 PCDHGB7Q9Y5F8 929 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 PCDHGA9Q9Y5G4 932 aaKnown RBP7.18□□□□□ -1.26
NEDD9-208ENST00000504387 HRH3Q9Y5N1 445 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SDK1Q7Z5N4 2213 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SCN2AQ99250 2005 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 FXYD6-FXYD2A0A087WZ82 144 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 LINC00862A6NCI5 91 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 OR5K3A6NET4 321 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 OR6C75A6NL08 312 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SLC9A3R1O14745 358 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-208ENST00000504387 TSPAN6O43657 245 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 SPDEFO95238 335 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 EGFP01133 1207 aa7.18□□□□□ -1.26
NEDD9-208ENST00000504387 IFNA14P01570 189 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms