RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 LOC285095A0A1B0GVY8 99 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 POLR1CO15160 346 aaPredicted RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 AFF1P51825 1210 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 RAB41Q5JT25 222 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 C3orf33Q6P1S2 294 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 CREB3L4Q8TEY5 395 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 TMEM121BQ9BXQ6 578 aaPredicted RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 T-ENOLP0DO92 83 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 RAB3BP20337 219 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 CDKN2CP42773 168 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 FAM189BP81408 668 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 LEG1Q6P5S2 330 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 ASCC1Q8N9N2 400 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 PAPD5Q8NDF8 572 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 OR4K13Q8NH42 304 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 HOXB13Q92826 284 aaPredicted RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 FAM46BQ96A09 425 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 ZBTB20Q9HC78 741 aaPredicted RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 LILRB3O75022 631 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 TIMP1P01033 207 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 THEGLP0DJG4 465 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 SDC1P18827 310 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 CSNK1DP48730 415 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 GRIN2CQ14957 1233 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 NTRK2Q16620 822 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 CDNFQ49AH0 187 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 LHPPQ9H008 270 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 LINC00597Q9H2U6 94 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 DCAF13Q9NV06 445 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 DDX60Q8IY21 1712 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 H7C417 338 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 FMO6PO60774 539 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 IL7P13232 177 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 GRPRP30550 384 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ZXDBP98169 803 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 SERTAD2Q14140 314 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 NSDHLQ15738 373 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 RAET1LQ5VY80 246 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 PNCKQ6P2M8 343 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ZC3H14Q6PJT7 736 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 HTR3DQ70Z44 454 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 PIANPQ8IYJ0 282 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ZFP41Q8N8Y5 198 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 SLC6A7Q99884 636 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 RNF38Q9H0F5 515 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 SYT4Q9H2B2 425 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 KCNN3Q9UGI6 736 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 UBQLN2Q9UHD9 624 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 GNRHRP30968 328 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 NCS1P62166 190 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ARSKQ6UWY0 536 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 FBXO27Q8NI29 283 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 DOK4Q8TEW6 326 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 PINK1Q9BXM7 581 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 TP63Q9H3D4 680 aaPredicted RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 FOLH1BQ9HBA9 442 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 TAS2R8Q9NYW2 309 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 PCDHA9Q9Y5H5 950 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 DNASE1P24855 282 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 GNMTQ14749 295 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 GDPGP1Q6ZNW5 385 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 SLC39A11Q8N1S5 342 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 FTMTQ8N4E7 242 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 MEPEQ9NQ76 525 aaPredicted RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ERVK13-1Q9NX77 482 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 COPZ2Q9P299 210 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ANKRD36CQ5JPF3 1778 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 M0R129 80 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 CASC3O15234 703 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 SMAD6O43541 496 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 NTHL1P78549 312 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 AIMP2Q13155 320 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ZNF709Q8N972 641 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ANKK1Q8NFD2 765 aa15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 ZNF300Q96RE9 604 aaPredicted RBP15.67■□□□□ 0.1
PCDHA1-203ENST00000504120 NOTOA8MTQ0 251 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 HBQ1P09105 142 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 AMY2BP19961 511 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 DLX2Q07687 328 aaPredicted RBP15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 ARHGAP19Q14CB8 494 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 RAB11BQ15907 218 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 ZNF852Q6ZMS4 543 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 DDIT4LQ96D03 193 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 PARPBPQ9NWS1 579 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 RIMS3Q9UJD0 308 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 USP3Q9Y6I4 520 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 NDUFB2O95178 105 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 PRLP01236 227 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 BMXP51813 675 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 PRPS1P60891 318 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 CDK5R2Q13319 367 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 MFSD13AQ14CX5 517 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 RHEBQ15382 184 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 RPS26P11Q5JNZ5 115 aaPredicted RBP15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 TMPPEQ6ZT21 453 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 USP53Q70EK8 1073 aa15.66■□□□□ 0.1
PCDHA1-203ENST00000504120 CDCA3Q99618 268 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms