RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SGCBQ16585 318 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 MSS51Q4VC12 460 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 RNASEH2BQ5TBB1 312 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 RAET1LQ5VY80 246 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 CYB5R2Q6BCY4 276 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 GRHL2Q6ISB3 625 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 TRMT10BQ6PF06 316 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 CCDC137Q6PK04 289 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 IGDCC3Q8IVU1 814 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 PDPRQ8NCN5 879 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 OR4K17Q8NGC6 315 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 GFM2Q969S9 779 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 C11orf24Q96F05 449 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 CFAP36Q96G28 342 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 MTERF1Q99551 399 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 ZNF717Q9BY31 904 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 BRINP2Q9C0B6 783 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 ESRP2Q9H6T0 727 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 NGBQ9NPG2 151 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 WHRNQ9P202 907 aa14.18□□□□□ -0.14
PDLIM7-210ENST00000503827 A0A096LNT2 108 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 LINC01387J3KSC0 135 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 LMX1BO60663 402 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 PLGP00747 810 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 CPMP14384 443 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 PORP16435 677 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 DRD5P21918 477 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 DEKP35659 375 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 PPICP45877 212 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 NUDT6P53370 316 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 ZNF672Q499Z4 452 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 NCMAPQ5T1S8 102 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 CLEC2AQ6UVW9 174 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 DNAJC14Q6Y2X3 702 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 STK32CQ86UX6 486 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 NUDT13Q86X67 352 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 SPATA6LQ8N4H0 392 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 NEUROG1Q92886 237 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 TMBIM1Q969X1 311 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 PRRG4Q9BZD6 226 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 PLAC1Q9HBJ0 212 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 ZNF337Q9Y3M9 751 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 PSAT1Q9Y617 370 aa14.17□□□□□ -0.14
PDLIM7-210ENST00000503827 FREM1Q5H8C1 2179 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PCNX3Q9H6A9 2034 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 H3BML4 177 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 TO15178 435 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 AQP8O94778 261 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PGRP06401 933 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 HK1P19367 917 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PSMB1P20618 241 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 IL11P20809 199 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 ZNF75DP51815 510 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 DSCR9P59020 149 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 MAP4K2Q12851 820 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 EXOSC7Q15024 291 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PRICKLE4Q2TBC4 344 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 CTU2Q2VPK5 515 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PGGHGQ32M88 737 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PPP4R4Q6NUP7 873 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 FAM111BQ6SJ93 734 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 MYLK4Q86YV6 388 aaPredicted RBP14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 ARIH2OSQ8N7S6 290 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 STEAP2Q8NFT2 490 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 OR10H5Q8NGA6 315 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 SLC35A4Q96G79 324 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 LRRC1Q9BTT6 524 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 TRAF4Q9BUZ4 470 aaPredicted RBP14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 GRIP2Q9C0E4 1043 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 MOCS1Q9NZB8 636 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 OPTCQ9UBM4 332 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PRODH2Q9UF12 536 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PLLPQ9Y342 182 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 TSC22D4Q9Y3Q8 395 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 PCDHGA11Q9Y5H2 935 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 SNX8Q9Y5X2 465 aa14.16□□□□□ -0.14
PDLIM7-210ENST00000503827 MALRD1Q5VYJ5 2156 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 DYSFO75923 2080 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 GBAP04062 536 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 CCDC166P0CW27 439 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 PYGBP11216 843 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 ZNF16P17020 682 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 KRT20P35900 424 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 ELK3P41970 407 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 CLDN20P56880 219 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 ATP6V0D1P61421 351 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 ZNF844Q08AG5 666 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 CUL3Q13618 768 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 EFR3AQ14156 821 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 SLMAPQ14BN4 828 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 OR4D1Q15615 310 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 HP1BP3Q5SSJ5 553 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 METTL25Q8N6Q8 603 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 EXT2Q93063 718 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 GMPPAQ96IJ6 420 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 ADAD1Q96M93 576 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 ADOQ96SZ5 270 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 FAIMQ9NVQ4 179 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 MAT2BQ9NZL9 334 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 PPP4R1LQ9P1A2 415 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms