RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 YIPF4Q9BSR8 244 aa16.4■□□□□ 0.22
CCHCR1-216ENST00000502557 Q9N2J8 555 aa16.4■□□□□ 0.22
CCHCR1-216ENST00000502557 SACM1LQ9NTJ5 587 aa16.4■□□□□ 0.22
CCHCR1-216ENST00000502557 ASF1BQ9NVP2 202 aa16.4■□□□□ 0.22
CCHCR1-216ENST00000502557 GPATCH2Q9NW75 528 aa16.4■□□□□ 0.22
CCHCR1-216ENST00000502557 CNOT11Q9UKZ1 510 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-216ENST00000502557 PCDHGB4Q9UN71 923 aa16.4■□□□□ 0.22
CCHCR1-216ENST00000502557 OR10H1Q9Y4A9 318 aa16.4■□□□□ 0.22
CCHCR1-216ENST00000502557 CPAMD8Q8IZJ3 1885 aa16.39■□□□□ 0.22
CCHCR1-216ENST00000502557 TLN1Q9Y490 2541 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 A0A0G2JMM0 328 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 A0A1W2PPB8 328 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 A0A1W2PRS3 328 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 ASPDHA6ND91 283 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 KIR3DP1A8MWS1 328 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 TP53I11O14683 189 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 REM1O75628 298 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 NKX2-2O95096 273 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 P04436 131 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 NCF2P19878 526 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 CNR1P21554 472 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 GABRA3P34903 492 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 PRIM2P49643 509 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 MEOX1P50221 254 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 ARFIP2P53365 341 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 TP53BP2Q13625 1128 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 CYP27C1Q4G0S4 372 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 TIGD2Q4W5G0 525 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 DESI1Q6ICB0 168 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 ZCCHC12Q6PEW1 402 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 FAM180AQ6UWF9 173 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 FBXW8Q8N3Y1 598 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 SLC16A11Q8NCK7 471 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 GOT1L1Q8NHS2 421 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 SPPL2AQ8TCT8 520 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 SLC9A6Q92581 669 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 VPS33AQ96AX1 596 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 FRMD6Q96NE9 622 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 INPP5KQ9BT40 448 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 SERHLQ9NQF3 203 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 KLHL14Q9P2G3 628 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 CBLCQ9ULV8 474 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 TRIM33Q9UPN9 1127 aa16.39■□□□□ 0.21
CCHCR1-216ENST00000502557 RNF103-CHMP3A0A140T963 221 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 GXYLT2A0PJZ3 443 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 PINLYPA6NC86 204 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 KLRC4-KLRK1H3BQV0 150 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 TSPAN2O60636 221 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 UGT2B11O75310 529 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 CD1EP15812 388 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 UQCRC2P22695 453 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 PIGAP37287 484 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 SEC24CP53992 1094 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 LRRC74AQ0VAA2 488 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 LASP1Q14847 261 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 DUSP5Q16690 384 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 VPS26BQ4G0F5 336 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 PRAMEF20Q5VT98 475 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 METTL21CQ5VZV1 264 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 ZNF324BQ6AW86 544 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 BLOC1S3Q6QNY0 202 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 MSANTD1Q6ZTZ1 278 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 NUP54Q7Z3B4 507 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 CPSF7Q8N684 471 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 BCORP1Q8N888 145 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 FAM98AQ8NCA5 519 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 OR2M7Q8NG81 312 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 GPR151Q8TDV0 419 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 PIK3R3Q92569 461 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 MIB2Q96AX9 1013 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 OTUB1Q96FW1 271 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 SLC35A4Q96G79 324 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 COL21A1Q96P44 957 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 NODALQ96S42 347 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 SECISBP2Q96T21 854 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 ACTRT3Q9BYD9 372 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 PROK2Q9HC23 129 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 TMEM45AQ9NWC5 275 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 CNIH4Q9P003 139 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 BSNQ9UPA5 3926 aa16.38■□□□□ 0.21
CCHCR1-216ENST00000502557 CCDC154A6NI56 674 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 OR6C70A6NIJ9 312 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 NR5A2O00482 541 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 CRYABP02511 175 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 ALOX5P09917 674 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 LSP1P33241 339 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 KRT20P35900 424 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 CDKN2CP42773 168 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 DNASE1L1P49184 302 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 RCAN2Q14206 197 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 IGFBP7Q16270 282 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 AGKQ53H12 422 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 BICRALQ6AI39 1079 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 CDC73Q6P1J9 531 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 BHLHB9Q6PI77 547 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 C6orf120Q7Z4R8 191 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 DNAJB8Q8NHS0 232 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 FAR1Q8WVX9 515 aa16.37■□□□□ 0.21
CCHCR1-216ENST00000502557 C10orf82Q8WW14 230 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms