RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	DNASE1L3	Q13609	305 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	PCOLCE	Q15113	449 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	MTX3	Q5HYI7	312 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	CRB2	Q5IJ48	1285 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	PRAMEF8	Q5VWM4	474 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	PRAMEF7	Q5VXH5	474 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	CYP2R1	Q6VVX0	501 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	NPSR1	Q6W5P4	371 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	ANKFN1	Q8N957	763 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	APCDD1L	Q8NCL9	501 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	OR1N1	Q8NGS0	311 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	NFKBID	Q8NI38	313 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	FBXO30	Q8TB52	745 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	ADAMTS15	Q8TE58	950 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	XAGE5	Q8WWM1	108 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	METTL21A	Q8WXB1	218 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	FIG4	Q92562	907 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	OTUB1	Q96FW1	271 aa	Predicted RBP	11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	TMEM19	Q96HH6	336 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	NSMCE2	Q96MF7	247 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	BTBD9	Q96Q07	612 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	NUDT9	Q9BW91	350 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	RUBCNL	Q9H714	662 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	BCL2L10	Q9HD36	194 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	DCAF13	Q9NV06	445 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	P2RX2	Q9UBL9	471 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	BCAP29	Q9UHQ4	241 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	ZNF223	Q9UK11	482 aa	Predicted RBP	11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	TCFL5	Q9UL49	500 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	FARSA	Q9Y285	508 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	PCDHGA6	Q9Y5G7	932 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	HS3ST3B1	Q9Y662	390 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	CLCA3P	Q9Y6N3	262 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	DSPP	Q9NZW4	1301 aa		11.28	□□□□□ -0.6
MATR3-231	ENST00000502394	IGHV3-20	A0A0C4DH32	117 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	LOC101059948	A0A1B0GTJ6	334 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	OR6C76	A6NM76	312 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394		H0YHG0	523 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394		J3QL48	77 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	SOCS6	O14544	535 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	GSTA4	O15217	222 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	DYRK3	O43781	588 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	SOX30	O94993	753 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	AGR2	O95994	175 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	IGHE	P01854	428 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	BCHE	P06276	602 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	CHRM4	P08173	479 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	GUSB	P08236	651 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	CT45A8	P0DMV1	189 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	CT45A9	P0DMV2	189 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	MMP11	P24347	488 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	FOLR3	P41439	243 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	CLCN2	P51788	898 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	ZNF155	Q12901	538 aa	Predicted RBP	11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	EBP	Q15125	230 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	SYPL1	Q16563	259 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	CT45A2	Q5DJT8	189 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	INTS11	Q5TA45	600 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	IRAK1BP1	Q5VVH5	260 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	REEP3	Q6NUK4	255 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	PAPD4	Q6PIY7	484 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	SPPL2C	Q8IUH8	684 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	C9orf40	Q8IXQ3	194 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	ADGRG5	Q8IZF4	528 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	AMER2	Q8N7J2	671 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	ZNF441	Q8N8Z8	693 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	ZNF511	Q8NB15	262 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	FAM110B	Q8TC76	370 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	CDS1	Q92903	461 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	NKD1	Q969G9	470 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	ADIPOR1	Q96A54	375 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	C8orf44	Q96CB5	159 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	TRNT1	Q96Q11	434 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	GPR87	Q9BY21	358 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	ITPA	Q9BY32	194 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	TRIM15	Q9C019	465 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	OR8D2	Q9GZM6	311 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	ZNF700	Q9H0M5	742 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	SLC38A1	Q9H2H9	487 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	PRODH2	Q9UF12	536 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	WASF3	Q9UPY6	502 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	LIPT1	Q9Y234	373 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	ANGPT4	Q9Y264	503 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	CFL2	Q9Y281	166 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	PADI2	Q9Y2J8	665 aa		11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	GPR55	Q9Y2T6	319 aa	Predicted RBP	11.27	□□□□□ -0.61
MATR3-231	ENST00000502394	IGHV1-45	A0A0A0MS14	117 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394		A8MVJ9	347 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394		H3BNX3	289 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	PGM3	O95394	542 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	AK1	P00568	194 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	ALOX5	P09917	674 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	COX6A1	P12074	109 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	RBMS1	P29558	406 aa	Known RBP	11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	TRHR	P34981	398 aa	Predicted RBP	11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	PPIC	P45877	212 aa		11.26	□□□□□ -0.61
MATR3-231	ENST00000502394	SMCP	P49901	116 aa	Predicted RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms