RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 UBXN8O00124 270 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 SCO2O43819 266 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 ERAL1O75616 437 aaKnown RBP10.49□□□□□ -0.73
CDK9-205ENST00000498339 PIAS1O75925 651 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 CGAP01215 116 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 FCGR2AP12318 317 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 HK1P19367 917 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 FEN1P39748 380 aaKnown RBP10.49□□□□□ -0.73
CDK9-205ENST00000498339 ARFIP1P53367 373 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 TPD52P55327 224 aaPredicted RBP10.49□□□□□ -0.73
CDK9-205ENST00000498339 CTBP2P56545 445 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 ARL4CP56559 192 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 RPS3AP61247 264 aaKnown RBP10.49□□□□□ -0.73
CDK9-205ENST00000498339 E2F2Q14209 437 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 BCL2A1Q16548 175 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 SGCBQ16585 318 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 CPSF6Q16630 551 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDK9-205ENST00000498339 C6orf52Q5T4I8 152 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 FAM111BQ6SJ93 734 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 FAM214BQ7L5A3 538 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 GBP7Q8N8V2 638 aaPredicted RBP10.49□□□□□ -0.73
CDK9-205ENST00000498339 GFM2Q969S9 779 aaKnown RBP10.49□□□□□ -0.73
CDK9-205ENST00000498339 LRRC39Q96DD0 335 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 ADOQ96SZ5 270 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 NTMT1Q9BV86 223 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 BEX2Q9BXY8 128 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 ACTR6Q9GZN1 396 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 SLCO5A1Q9H2Y9 848 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 ALG2Q9H553 416 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 SMYD2Q9NRG4 433 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 PRODH2Q9UF12 536 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 MAGED1Q9Y5V3 778 aaPredicted RBP10.49□□□□□ -0.73
CDK9-205ENST00000498339 PRR14LQ5THK1 2151 aa10.49□□□□□ -0.73
CDK9-205ENST00000498339 PCNX3Q9H6A9 2034 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 ZIC3O60481 467 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 TNFRSF21O75509 655 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 KLK1P06870 262 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 PIK3CGP48736 1102 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 DSCR4P56555 118 aaPredicted RBP10.48□□□□□ -0.73
CDK9-205ENST00000498339 CUL3Q13618 768 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 EFR3AQ14156 821 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 FRG1Q14331 258 aaKnown RBP10.48□□□□□ -0.73
CDK9-205ENST00000498339 SLMAPQ14BN4 828 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 MORF4L2Q15014 288 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 PRICKLE4Q2TBC4 344 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 LIPJQ5W064 366 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 RAPH1Q70E73 1250 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 MILR1Q7Z6M3 343 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 FBXO36Q8NEA4 188 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 OR5M1Q8NGP8 315 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 RAB3IL1Q8TBN0 382 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 STAG3L4Q8TBR4 150 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 KCNK17Q96T54 332 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 DDX47Q9H0S4 455 aaKnown RBP10.48□□□□□ -0.73
CDK9-205ENST00000498339 PFDN4Q9NQP4 134 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 MAT2BQ9NZL9 334 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 CLEC4AQ9UMR7 237 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 LIPT1Q9Y234 373 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 ZNF175Q9Y473 711 aa10.48□□□□□ -0.73
CDK9-205ENST00000498339 YLPM1P49750 1951 aaKnown RBP10.48□□□□□ -0.73
CDK9-205ENST00000498339 WISP3O95389 354 aaPredicted RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 IGHV4-39P01824 125 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 CD3EP07766 207 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 SOD3P08294 240 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 S1PR1P21453 382 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 DRD5P21918 477 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 ALDH9A1P49189 494 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 SUCLG1P53597 346 aaKnown RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 MAPK12P53778 367 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 B3GALT5-AS1P59052 145 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 GPX6P59796 221 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 MRPS35P82673 323 aaKnown RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 SRSF2Q01130 221 aaKnown RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 ILF2Q12905 390 aaKnown RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 PDIA2Q13087 525 aaKnown RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 STX5Q13190 355 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 FASTKD3Q14CZ7 662 aaKnown RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 LTB4RQ15722 352 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 STAC2Q6ZMT1 411 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 LARP4Q71RC2 724 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDK9-205ENST00000498339 STK32CQ86UX6 486 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 OR6K3Q8NGY3 331 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 SMAP2Q8WU79 429 aaPredicted RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 UBTD2Q8WUN7 234 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 CDKL2Q92772 493 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 EFHD2Q96C19 240 aaPredicted RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 KLHL29Q96CT2 875 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 SERPINI1Q99574 410 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 TMEM204Q9BSN7 226 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 SHARPINQ9H0F6 387 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 DSN1Q9H410 356 aa10.47□□□□□ -0.73
CDK9-205ENST00000498339 BARX1Q9HBU1 254 aaPredicted RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 MRPS18CQ9Y3D5 142 aaKnown RBP10.47□□□□□ -0.73
CDK9-205ENST00000498339 C17orf51A8MQB3 221 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 H0YIV9 168 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 OVOL3O00110 214 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 SSX4O60224 188 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 GPRIN2O60269 458 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 KERAO60938 352 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms