RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 RNF44Q7L0R7 432 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ABHD13Q7L211 337 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ANKRD46Q86W74 232 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 C17orf82Q86X59 251 aaPredicted RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 TICAM1Q8IUC6 712 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 TMEM126BQ8IUX1 230 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 SAMD14Q8IZD0 417 aaPredicted RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ZCCHC7Q8N3Z6 543 aaKnown RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ACOT4Q8N9L9 421 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 FAM47BQ8NA70 645 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 FAM156AQ8NDB6 213 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 CATSPER1Q8NEC5 780 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 OR2T12Q8NG77 320 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 OR6C4Q8NGE1 309 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 OR4A15Q8NGL6 344 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 OR10A6Q8NH74 314 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 GOT1L1Q8NHS2 421 aaPredicted RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ZFP28Q8NHY6 868 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 FLVCR1-AS1Q8TAF5 88 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 CEP76Q8TAP6 659 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 PYDC1Q8WXC3 89 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 OR5P2Q8WZ92 322 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 RSC1A1Q92681 617 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 TM4SF19Q96DZ7 209 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ZDHHC12Q96GR4 267 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 AHCYL2Q96HN2 611 aaKnown RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 CCDC140Q96MF4 163 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 NSMCE2Q96MF7 247 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ZNF583Q96ND8 569 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 OR2A5Q96R48 311 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 SERINC2Q96SA4 455 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 CD180Q99467 661 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 TSC22D3Q99576 134 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ELF4Q99607 663 aaPredicted RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 C17orf62Q9BQA9 187 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 CPPED1Q9BRF8 314 aaPredicted RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 INPP5KQ9BT40 448 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 SORBS1Q9BX66 1292 aaKnown RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 JAM3Q9BX67 310 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 UGT2B28Q9BY64 529 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 FAM192AQ9GZU8 254 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 RAB33BQ9H082 229 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ABCG4Q9H172 646 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 KLHL31Q9H511 634 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 GORASP2Q9H8Y8 452 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 SERHLQ9NQF3 203 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 GIMAP4Q9NUV9 329 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 ETAA1Q9NY74 926 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 TAS2R9Q9NYW1 312 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 EHD3Q9NZN3 535 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 C6orf203Q9P0P8 240 aaPredicted RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 NKX1-2Q9UD57 310 aaPredicted RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 PLEKHB1Q9UF11 243 aaPredicted RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 EPHA6Q9UF33 1036 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 PHF11Q9UIL8 331 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 POMT2Q9UKY4 750 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 KLHL20Q9Y2M5 609 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 AP4S1Q9Y587 144 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 GMEB1Q9Y692 573 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 SPACA6W5XKT8 324 aa4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 SPENQ96T58 3664 aaKnown RBP4.98□□□□□ -1.61
HMGXB4-208ENST00000498325 TNRC6BQ9UPQ9 1833 aaKnown RBP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 A0A0A6YYD5 115 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 A0A0G2JN53 185 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 FAM220BPB1ANY3 271 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 H0YGG7 62 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 CXCR6O00574 342 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 ARPC2O15144 300 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 PDPK1O15530 556 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 KLF4O43474 513 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 NUDT21O43809 227 aaKnown RBP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 B3GALT2O43825 422 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 BRINP1O60477 761 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 SDC3O75056 442 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 C6orf47O95873 294 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 EIF2S1P05198 315 aaKnown RBP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 ABCB1P08183 1280 aaPredicted RBP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 SMIM10L1P0DMW3 83 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 FCGR1AP12314 374 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 ALOX12P18054 663 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 GPX2P18283 190 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 GGT1P19440 569 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 FBLP22087 321 aaKnown RBP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 UQCRC2P22695 453 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 NTSP30990 170 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 CHI3L1P36222 383 aaPredicted RBP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 CDKN2CP42773 168 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 CAPZBP47756 277 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 PTDSS1P48651 473 aaKnown RBP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 ERFP50548 548 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 POLE2P56282 527 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 SESN3P58005 492 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 OR4D2P58180 307 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 RAB8AP61006 207 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 ARF3P61204 181 aaPredicted RBP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 BTN3A2P78410 334 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 COL10A1Q03692 680 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 TLE1Q04724 770 aa4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 TARDBPQ13148 414 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGXB4-208ENST00000498325 TOP3AQ13472 1001 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms