RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 NAP1L5Q96NT1 182 aaPredicted RBP3.66□□□□□ -1.82
VPS36-206ENST00000497149 RANBP9Q96S59 729 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 KCNK16Q96T55 309 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 WRAP53Q9BUR4 548 aaKnown RBP3.66□□□□□ -1.82
VPS36-206ENST00000497149 KRT23Q9C075 422 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.66□□□□□ -1.82
VPS36-206ENST00000497149 IMPAD1Q9NX62 359 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 SMAD5-AS1Q9Y6J3 95 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 CUX2O14529 1486 aa3.66□□□□□ -1.82
VPS36-206ENST00000497149 ZSCAN5CA6NGD5 496 aaPredicted RBP3.65□□□□□ -1.83
VPS36-206ENST00000497149 CCT8L1PA6NM43 557 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 RHBDL1O75783 438 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 STAM2O75886 525 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 NDUFA7O95182 113 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 PTBP3O95758 552 aaKnown RBP3.65□□□□□ -1.83
VPS36-206ENST00000497149 GHRP10912 638 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 FUT1P19526 365 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 DNAJB1P25685 340 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 POU3F4P49335 361 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 MRPS6P82932 125 aaKnown RBP3.65□□□□□ -1.83
VPS36-206ENST00000497149 RUNX3Q13761 415 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 EIF2B1Q14232 305 aaKnown RBP3.65□□□□□ -1.83
VPS36-206ENST00000497149 ZIC1Q15915 447 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 LDLRAP1Q5SW96 308 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 BEND6Q5SZJ8 279 aaPredicted RBP3.65□□□□□ -1.83
VPS36-206ENST00000497149 RAET1GQ6H3X3 334 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 IRGCQ6NXR0 463 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 LEG1Q6P5S2 330 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 ZCCHC12Q6PEW1 402 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 Q6ZR54 194 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 P4HA3Q7Z4N8 544 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 NAXDQ8IW45 347 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 C9orf85Q96MD7 179 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 DCAF13Q9NV06 445 aaKnown RBP3.65□□□□□ -1.83
VPS36-206ENST00000497149 GDAP2Q9NXN4 497 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 P2RX2Q9UBL9 471 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 GHRLQ9UBU3 117 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 PRODH2Q9UF12 536 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 ZNF107Q9UII5 783 aaPredicted RBP3.65□□□□□ -1.83
VPS36-206ENST00000497149 CLCA3PQ9Y6N3 262 aa3.65□□□□□ -1.83
VPS36-206ENST00000497149 H3BTX0 84 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 LGALS8O00214 317 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 ARF4P18085 180 aaPredicted RBP3.64□□□□□ -1.83
VPS36-206ENST00000497149 IGFBP5P24593 272 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 CHRNA3P32297 505 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 METAP1P53582 386 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 IL9RQ01113 521 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 PAX2Q02962 417 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 ZP4Q12836 540 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 CEBPEQ15744 281 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 TIMM50Q3ZCQ8 353 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 ATAD3CQ5T2N8 411 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 ISLR2Q6UXK2 745 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 ZNF562Q6V9R5 426 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 NET1Q7Z628 596 aaPredicted RBP3.64□□□□□ -1.83
VPS36-206ENST00000497149 CCDC36Q8IYA8 594 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 LINC00612Q8N6U2 182 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 FNDC8Q8TC99 324 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 SLC25A36Q96CQ1 311 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 CARD6Q9BX69 1037 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 ROPN1Q9HAT0 212 aaPredicted RBP3.64□□□□□ -1.83
VPS36-206ENST00000497149 NGBQ9NPG2 151 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 TIGARQ9NQ88 270 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 FAM120CQ9NX05 1096 aaKnown RBP3.64□□□□□ -1.83
VPS36-206ENST00000497149 KLRF1Q9NZS2 232 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 NTNG1Q9Y2I2 539 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 NAALAD2Q9Y3Q0 740 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 RALGAPA1Q6GYQ0 2036 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 ABCC4O15439 1325 aa3.64□□□□□ -1.83
VPS36-206ENST00000497149 TRBV7-9A0A0J9YWB2 115 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 A0A1W2PQ72 361 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 TTC26A0AVF1 554 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 FBLL1A6NHQ2 334 aaKnown RBP3.63□□□□□ -1.83
VPS36-206ENST00000497149 H0YL77 283 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 PHOX2AO14813 284 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 THY1P04216 161 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 TSPAN8P19075 237 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 STK19P49842 368 aaPredicted RBP3.63□□□□□ -1.83
VPS36-206ENST00000497149 ARHGDIBP52566 201 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 GMFBP60983 142 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 PPIAP62937 165 aaKnown RBP3.63□□□□□ -1.83
VPS36-206ENST00000497149 DMKNQ6E0U4 476 aaPredicted RBP3.63□□□□□ -1.83
VPS36-206ENST00000497149 PNCKQ6P2M8 343 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 VITQ6UXI7 678 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 BAIAP2L2Q6UXY1 529 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 HACD2Q6Y1H2 254 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 SYVN1Q86TM6 617 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 ADCK1Q86TW2 530 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 ERICH1Q86X53 443 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 HSCBQ8IWL3 235 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 NFAM1Q8NET5 270 aaPredicted RBP3.63□□□□□ -1.83
VPS36-206ENST00000497149 RFESDQ8TAC1 157 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 C11orf24Q96F05 449 aaPredicted RBP3.63□□□□□ -1.83
VPS36-206ENST00000497149 SLC7A10Q9NS82 523 aa3.63□□□□□ -1.83
VPS36-206ENST00000497149 DUS2Q9NX74 493 aaKnown RBP3.63□□□□□ -1.83
VPS36-206ENST00000497149 MTF2Q9Y483 593 aaPredicted RBP3.63□□□□□ -1.83
VPS36-206ENST00000497149 NCAPD2Q15021 1401 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 RNF222A6NCQ9 220 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 EFCAB7A8K855 629 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 PDXKO00764 312 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms