RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 IFT52Q9Y366 437 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 RPL36Q9Y3U8 105 aaKnown RBP12.22□□□□□ -0.45
GARNL3-220ENST00000496711 TDRD6O60522 2096 aaKnown RBP12.22□□□□□ -0.45
GARNL3-220ENST00000496711 KIR2DS5A0A0G2JLQ3 304 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 A0A0G2JNG1 304 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 ZNF860A6NHJ4 632 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 OR5K4A6NMS3 321 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 H0YGG7 62 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 KIR2DS3K7RE56 304 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 ZSCAN9O15535 394 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 FRS3O43559 492 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 CYP7B1O75881 506 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 ZIC2O95409 532 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 DBTP11182 482 aaKnown RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 PVRP15151 417 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 IFNA8P32881 189 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 GRK5P34947 590 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 IFNGR2P38484 337 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 LSSP48449 732 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 PCYT1AP49585 367 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 CCR5P51681 352 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 ARF3P61204 181 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 ZNF91Q05481 1191 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 KIR2DS5Q14953 304 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 TRAM2Q15035 370 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 RGS21Q2M5E4 152 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 KIAA0895LQ68EN5 471 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 OR4N5Q8IXE1 308 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 MFSD4AQ8N468 514 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 SLC16A11Q8NCK7 471 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 FLCNQ8NFG4 579 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 SLC37A2Q8TED4 501 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 DIO2Q92813 273 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 OR5M11Q96RB7 305 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 MGLLQ99685 303 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 CACYBPQ9HB71 228 aaKnown RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 POLMQ9NP87 494 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 TMEM74BQ9NUR3 256 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 TVP23BQ9NYZ1 205 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 ZNF443Q9Y2A4 671 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 GPR55Q9Y2T6 319 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 MRPS2Q9Y399 296 aaKnown RBP12.21□□□□□ -0.45
GARNL3-220ENST00000496711 CHST2Q9Y4C5 530 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 PCDHGA3Q9Y5H0 932 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 SPACA6W5XKT8 324 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 UNC80Q8N2C7 3258 aa12.21□□□□□ -0.45
GARNL3-220ENST00000496711 XIRP2A4UGR9 3374 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 TMEM131Q92545 1883 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 A0A087WUU8 490 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 SHISA7A6NL88 538 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 CPSF4LA6NMK7 179 aaKnown RBP12.21□□□□□ -0.46
GARNL3-220ENST00000496711 FAM170BA6NMN3 283 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 SULT1C4O75897 302 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 IGLV3-19P01714 112 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 EIF2S1P05198 315 aaKnown RBP12.21□□□□□ -0.46
GARNL3-220ENST00000496711 CCNYL3P0C7X3 344 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 BMP4P12644 408 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 GLULP15104 373 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 PORP16435 677 aaPredicted RBP12.21□□□□□ -0.46
GARNL3-220ENST00000496711 CSTF2P33240 577 aaKnown RBP eCLIP12.21□□□□□ -0.46
GARNL3-220ENST00000496711 AVPR1BP47901 424 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 RGS8P57771 180 aaPredicted RBP12.21□□□□□ -0.46
GARNL3-220ENST00000496711 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.46
GARNL3-220ENST00000496711 RHAGQ02094 409 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 ST3GAL3Q11203 375 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 GINS1Q14691 196 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 ARHGAP11BQ3KRB8 267 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF628Q5EBL2 1059 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 DCDC5Q6ZRR9 648 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 MCFD2Q8NI22 146 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 GNPDA2Q8TDQ7 276 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 CHPT1Q8WUD6 406 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 SLC9A6Q92581 669 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 ZG16BQ96DA0 208 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 MSANTD3Q96H12 275 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 TMEM80Q96HE8 168 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 COX4I2Q96KJ9 171 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 SLC6A18Q96N87 628 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 GPA33Q99795 319 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 OR51E2Q9H255 320 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 SEMA4GQ9NTN9 838 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 HRASLS2Q9NWW9 162 aa12.21□□□□□ -0.46
GARNL3-220ENST00000496711 LOC100506127A0A0U1RQW1 187 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 METTL15A6NJ78 407 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 CCRL2O00421 344 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 AP3D1O14617 1153 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 PRKYO43930 277 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 FCMRO60667 390 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 CBFA2T3O75081 653 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 DNAJB6O75190 326 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 CELA2BP08218 269 aaPredicted RBP12.2□□□□□ -0.46
GARNL3-220ENST00000496711 ACP2P11117 423 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 SMSP52788 366 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 CDK5Q00535 292 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.2□□□□□ -0.46
GARNL3-220ENST00000496711 EIF2B5Q13144 721 aaKnown RBP12.2□□□□□ -0.46
GARNL3-220ENST00000496711 ITGADQ13349 1161 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 ATP1A4Q13733 1029 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 COL19A1Q14993 1142 aa12.2□□□□□ -0.46
GARNL3-220ENST00000496711 INAQ16352 499 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms