RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 L2HGDHQ9H9P8 463 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 GIMAP4Q9NUV9 329 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 OXSMQ9NWU1 459 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 KCNN3Q9UGI6 736 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 EXO1Q9UQ84 846 aaKnown RBP13.01□□□□□ -0.33
VTI1A-209ENST00000496445 CCL27Q9Y4X3 112 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 HSPB2A8KAH6 182 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 C17orf51A8MQB3 221 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 MYO1GB0I1T2 1018 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 PLOD3O60568 738 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 TSPAN2O60636 221 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 BCAS2O75934 225 aaPredicted RBP13□□□□□ -0.33
VTI1A-209ENST00000496445 RSL1D1O76021 490 aaKnown RBP13□□□□□ -0.33
VTI1A-209ENST00000496445 ZNF136P52737 540 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 SNTB1Q13884 538 aaKnown RBP13□□□□□ -0.33
VTI1A-209ENST00000496445 HSPB2Q16082 182 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 ERCC6LQ2NKX8 1250 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 SPDYAQ5MJ70 313 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 LACC1Q8IV20 430 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 PM20D2Q8IYS1 436 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 CLYBLQ8N0X4 340 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 C4orf33Q8N1A6 199 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 OR4N2Q8NGD1 307 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 RDH11Q8TC12 318 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 ABTB1Q969K4 478 aaPredicted RBP13□□□□□ -0.33
VTI1A-209ENST00000496445 COL21A1Q96P44 957 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 ADOQ96SZ5 270 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 SH3GL2Q99962 352 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 SHCBP1LQ9BZQ2 653 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 OR2B2Q9GZK3 357 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 MYNNQ9NPC7 610 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 SERHLQ9NQF3 203 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 ITGB1BP2Q9UKP3 347 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 CAMK2AQ9UQM7 478 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 PTGDR2Q9Y5Y4 395 aa13□□□□□ -0.33
VTI1A-209ENST00000496445 MAP1AP78559 2803 aaPredicted RBP13□□□□□ -0.33
VTI1A-209ENST00000496445 COPEO14579 308 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 REM1O75628 298 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 PSMG1O95456 288 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 JUNP05412 331 aaKnown RBP12.99□□□□□ -0.33
VTI1A-209ENST00000496445 KRT4P19013 534 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 BMP5P22003 454 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 TIMP3P35625 211 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 MC3RP41968 323 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 CCT5P48643 541 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 NCBP2P52298 156 aaKnown RBP eCLIP12.99□□□□□ -0.33
VTI1A-209ENST00000496445 GAS1P54826 345 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 NAA20P61599 178 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 PSG6Q00889 435 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 SLC18A2Q05940 514 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 C2orf80Q0P641 193 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 ZNF155Q12901 538 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-209ENST00000496445 PCLAFQ15004 111 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 TESK1Q15569 626 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 IMPG1Q17R60 797 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 LIPMQ5VYY2 423 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 NSUN5P2Q63ZY6 315 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 CLEC6AQ6EIG7 209 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 TMEM107Q6UX40 140 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 TMCO6Q96DC7 493 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 TRIM44Q96DX7 344 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-209ENST00000496445 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 GLIPR2Q9H4G4 154 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 ANKZF1Q9H8Y5 726 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 PPCSQ9HAB8 311 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 SENP1Q9P0U3 644 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 FBXL2Q9UKC9 423 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 GRID1Q9ULK0 1009 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 WIF1Q9Y5W5 379 aa12.99□□□□□ -0.33
VTI1A-209ENST00000496445 MED12LQ86YW9 2145 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 MBD3L4A6NDZ8 208 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-209ENST00000496445 MBD3L3A6NE82 208 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-209ENST00000496445 MBD3L5A6NJ08 208 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-209ENST00000496445 CD8B2A6NJW9 211 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 H3BQF6 201 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 CBR3O75828 277 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 UROSP10746 265 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 CPA3P15088 417 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 PRPH2P23942 346 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 TACR1P25103 407 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 IL12BP29460 328 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 MPIP34949 423 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 ASCL1P50553 236 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 GFRA1P56159 465 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 MYBPHQ13203 477 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 KIAA0040Q15053 153 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 CFAP157Q5JU67 520 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 NOXRED1Q6NXP6 359 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 ARSKQ6UWY0 536 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 LARP4Q71RC2 724 aaKnown RBP eCLIP12.98□□□□□ -0.33
VTI1A-209ENST00000496445 C10orf107Q8IVU9 208 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 SLC44A2Q8IWA5 706 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-209ENST00000496445 CCDC63Q8NA47 563 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 MBD3L2Q8NHZ7 208 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-209ENST00000496445 FAM76AQ8TAV0 307 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 EFHD2Q96C19 240 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-209ENST00000496445 BBS4Q96RK4 519 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 TRIB1Q96RU8 372 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 G6PC3Q9BUM1 346 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 STMN4Q9H169 189 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms