RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 OR9Q2Q8NGE9 314 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 OR8J2Q8NGG1 315 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 OR52I1Q8NGK6 324 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 GEMIN6Q8WXD5 167 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 RAD51AP1Q96B01 352 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CMTM7Q96FZ5 175 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZDHHC12Q96GR4 267 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZNF285Q96NJ3 590 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 DDOQ99489 341 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SORBS1Q9BX66 1292 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZNF768Q9H5H4 540 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 NLE1Q9NVX2 485 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 A0A1B0GUH1 482 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SERTM1A2A2V5 107 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ARHGEF33A8MVX0 844 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 C2orf74A8MZ97 194 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CCL22O00626 93 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 EFCAB14O75071 495 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 KDM4BO94953 1096 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 PEX11BO96011 259 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 HEXAP06865 529 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZNF806P0C7X5 589 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 GIFP27352 417 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 PREPP48147 710 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ERVK-25P63136 954 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 GUCA2BQ16661 112 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 UGT8Q16880 541 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 DCAF4L1Q3SXM0 396 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 PAN3Q58A45 887 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 FAM69AQ5T7M9 428 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 C9orf57Q5W0N0 161 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 HBMQ6B0K9 141 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 GLB1LQ6UWU2 654 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ANKRD46Q86W74 232 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ARMC10Q8N2F6 343 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SLC44A3Q8N4M1 653 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SYT14Q8NB59 555 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 MDGA1Q8NFP4 955 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 NEIL3Q8TAT5 605 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CD200R1Q8TD46 325 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CSGALNACT1Q8TDX6 532 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 HASPINQ8TF76 798 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 UBTD2Q8WUN7 234 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 EEF1AKMT1Q8WVE0 214 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 HSD17B8Q92506 261 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 EDEM1Q92611 657 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SLC6A18Q96N87 628 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CASD1Q96PB1 797 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 PAAF1Q9BRP4 392 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ARHGAP9Q9BRR9 750 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 POLDIP3Q9BY77 421 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 FAM126AQ9BYI3 521 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 MTG2Q9H4K7 406 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 TPT1P8Q9HAU6 139 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RPS6KB2Q9UBS0 482 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZMYM5Q9UJ78 669 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 PPT2Q9UMR5 302 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CLCA2Q9UQC9 943 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 KCTD3Q9Y597 815 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SNX10Q9Y5X0 201 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 MRPL42Q9Y6G3 142 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 COL4A4P53420 1690 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 C5orf42Q9H799 3197 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CASTOR2A6NHX0 329 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZNF729A6NN14 1252 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZNF593O00488 134 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 CHST10O43529 356 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 LANCL1O43813 399 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 FBP1P09467 338 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 FOLR2P14207 255 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 TTPAP49638 278 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RGS4P49798 205 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SELENOPP49908 381 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 MMP15P51511 669 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SEC61A1P61619 476 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZNF155Q12901 538 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 PTPRNQ16849 979 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SPDYE7PQ495Y7 208 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZNF770Q6IQ21 691 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 FUT10Q6P4F1 479 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 LYPD4Q6UWN0 246 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 GSG1LQ6UXU4 331 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 DEF8Q6ZN54 512 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ZNF621Q6ZSS3 439 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 TMUB2Q71RG4 321 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 METTL23Q86XA0 190 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 OR6V1Q8N148 313 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RTL3Q8N8U3 475 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 ASB13Q8WXK3 278 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CNOT9Q92600 299 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 GTPBP3Q969Y2 492 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 IL4I1Q96RQ9 567 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SEBOXQ9HB31 216 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 SLAMF7Q9NQ25 335 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CRTAC1Q9NQ79 661 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 DNAJC27Q9NZQ0 273 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 INSL6Q9Y581 213 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 COL4A6Q14031 1691 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 UNC80Q8N2C7 3258 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 AGRPO00253 132 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms