RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 ZNF551Q7Z340 670 aaPredicted RBP11.27□□□□□ -0.61
TRIM59-207ENST00000496222 NUDCD3Q8IVD9 361 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 HOMEZQ8IX15 550 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 DDIASQ8IXT1 998 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 CLHC1Q8NHS4 586 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 AGR3Q8TD06 166 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 HOXB13Q92826 284 aaPredicted RBP11.27□□□□□ -0.61
TRIM59-207ENST00000496222 TMBIM1Q969X1 311 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 CIDECQ96AQ7 238 aaPredicted RBP11.27□□□□□ -0.61
TRIM59-207ENST00000496222 TMEM41AQ96HV5 264 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 GNRHR2Q96P88 292 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 SORT1Q99523 831 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 REEP4Q9H6H4 257 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 MIEF1Q9NQG6 463 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 PNPLA3Q9NST1 481 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 TAS2R9Q9NYW1 312 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 NTMQ9P121 344 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 HAO1Q9UJM8 370 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 KLF2Q9Y5W3 355 aaPredicted RBP11.27□□□□□ -0.61
TRIM59-207ENST00000496222 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
TRIM59-207ENST00000496222 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 TRGV5A0A0B4J1U4 118 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 WDR91A4D1P6 747 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 AKAP10O43572 662 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 ICOSLGO75144 302 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 PEX11AO75192 247 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 SERPINE1P05121 402 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 HPNP05981 417 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 PTPN6P29350 595 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 MAN2A2P49641 1150 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 GAS1P54826 345 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
TRIM59-207ENST00000496222 ABCE1P61221 599 aaKnown RBP11.26□□□□□ -0.61
TRIM59-207ENST00000496222 PLCXD2Q0VAA5 305 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 SNTA1Q13424 505 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 CHI3L2Q15782 390 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 ZNF630Q2M218 657 aaPredicted RBP11.26□□□□□ -0.61
TRIM59-207ENST00000496222 TMEM198Q66K66 360 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 TIGD3Q6B0B8 471 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 ZNF781Q8N8C0 355 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 WDSUB1Q8N9V3 476 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 OR5M9Q8NGP3 310 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 NEIL3Q8TAT5 605 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 NUDT8Q8WV74 236 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 GIMAP5Q96F15 307 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 ZNF597Q96LX8 424 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 PPP3R2Q96LZ3 170 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 COL21A1Q96P44 957 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 SLC6A15Q9H2J7 730 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 TP63Q9H3D4 680 aaPredicted RBP11.26□□□□□ -0.61
TRIM59-207ENST00000496222 GALNT9Q9HCQ5 603 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 ATP6V1HQ9UI12 483 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 C15orf41Q9Y2V0 281 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 FAM215AQ9Y5M1 114 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 MED12Q93074 2177 aa11.26□□□□□ -0.61
TRIM59-207ENST00000496222 C2orf72A6NCS6 295 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 TMEM114B3SHH9 223 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 BCKDKO14874 412 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 SNPHO15079 494 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 PDPK1O15530 556 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 ZWINTO95229 277 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 NTSP30990 170 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 CDK9P50750 372 aaKnown RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 SMSP52788 366 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 GAB1Q13480 694 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 EXOSC6Q5RKV6 272 aaKnown RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 SP5Q6BEB4 398 aaPredicted RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 SLC30A6Q6NXT4 461 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 WDR53Q7Z5U6 358 aaPredicted RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 PACS2Q86VP3 889 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 SLC44A2Q8IWA5 706 aaPredicted RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 RIMKLAQ8IXN7 391 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 ACBD4Q8NC06 268 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 PPCDCQ96CD2 204 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 TLCD1Q96CP7 247 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 MTERF3Q96E29 417 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 JSRP1Q96MG2 331 aaPredicted RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 ADOQ96SZ5 270 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 LMF2Q9BU23 707 aaKnown RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 CENPHQ9H3R5 247 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 SIRT3Q9NTG7 399 aaPredicted RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 ACSS1Q9NUB1 689 aaPredicted RBP11.25□□□□□ -0.61
TRIM59-207ENST00000496222 CSMD2Q7Z408 3487 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 PCNX3Q9H6A9 2034 aa11.25□□□□□ -0.61
TRIM59-207ENST00000496222 NUP214P35658 2090 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-207ENST00000496222 PRAMEF25A6NGN4 478 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 PRSS44E7EML9 344 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 C19orf84I3L1E1 186 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 GNB5O14775 395 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 SCAMP2O15127 329 aaKnown RBP11.24□□□□□ -0.61
TRIM59-207ENST00000496222 COQ9O75208 318 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 SKAP2O75563 359 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-207ENST00000496222 REM1O75628 298 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 HSPA4LO95757 839 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 BGNP21810 368 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 ACVR2AP27037 513 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 GDF1P27539 372 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 HTR1EP28566 365 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 ASMTP46597 345 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms