RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	EFNA3	P52797	238 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	HADHB	P55084	474 aa	Known RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	BPIFB3	P59826	476 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	PDE1B	Q01064	536 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	TAF1A	Q15573	450 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ZNF674	Q2M3X9	581 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	IGSF11	Q5DX21	431 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SGO1	Q5FBB7	561 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	VWA2	Q5GFL6	755 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	C1orf189	Q5VU69	101 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	KCTD11	Q693B1	232 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ZNF324B	Q6AW86	544 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	C11orf63	Q6NUN7	778 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ZNF585A	Q6P3V2	769 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SHQ1	Q6PI26	577 aa	Known RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	TMEM65	Q6PI78	240 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	TMEM220	Q6QAJ8	160 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	PACS1	Q6VY07	963 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	H2AFV	Q71UI9	128 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	TBC1D26	Q86UD7	250 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	AMIGO1	Q86WK6	493 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	EPHX4	Q8IUS5	362 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	KATNAL2	Q8IYT4	538 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	GALNT16	Q8N428	558 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	LINC01555	Q8NAE3	123 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	WFDC11	Q8NEX6	87 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	OR4E2	Q8NGC2	313 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	OR4K2	Q8NGD2	314 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	OR5AR1	Q8NGP9	310 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	OR13C4	Q8NGS5	318 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	GSDMB	Q8TAX9	411 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	LKAAEAR1	Q8TD35	194 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	GRHL3	Q8TE85	626 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	LCN9	Q8WX39	176 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SGCD	Q92629	289 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	REPS1	Q96D71	796 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	TRIM44	Q96DX7	344 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ZNF285	Q96NJ3	590 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	VAT1	Q99536	393 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	FOXC2	Q99958	501 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	APOL2	Q9BQE5	337 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	CCDC106	Q9BWC9	280 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ILKAP	Q9H0C8	392 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SLC26A1	Q9H2B4	701 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	SRMS	Q9H3Y6	488 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	TFB2M	Q9H5Q4	396 aa	Known RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	C10orf88	Q9H8K7	445 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	DHCR7	Q9UBM7	475 aa	Known RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	RSPH14	Q9UHP6	348 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ST6GALNAC2	Q9UJ37	374 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ACSL5	Q9ULC5	683 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	CARD8	Q9Y2G2	431 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	AAR2	Q9Y312	384 aa	Known RBP	3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	HEBP2	Q9Y5Z4	205 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	ANKRD12	Q6UB98	2062 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981	CMYA5	Q8N3K9	4069 aa		3.97	□□□□□ -1.77
VPS52-222	ENST00000495981		A0A0J9YY10	115 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981		A0A1B0GX78	115 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	SLC5A10	A0PJK1	596 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	SYCE3	A1L190	88 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	KRT87P	A6NCN2	255 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	DBX1	A6NMT0	343 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	HACD1	B0YJ81	288 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	APOC4-APOC2	K7ER74	178 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	STX7	O15400	261 aa	Known RBP	3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	AVIL	O75366	819 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	OR2B3	O76000	313 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	NEURL1	O76050	574 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	SIX3	O95343	332 aa	Predicted RBP	3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	SLU7	O95391	586 aa	Known RBP	3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	FTCD	O95954	541 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	IL1A	P01583	271 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	APOC2	P02655	101 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	KLK3	P07288	261 aa	Predicted RBP	3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	ATP1B2	P14415	290 aa	Predicted RBP	3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	BMP7	P18075	431 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	MAG	P20916	626 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	MMP11	P24347	488 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	FOXN2	P32314	431 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	ARHGAP25	P42331	645 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	SLC1A1	P43005	524 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	CD151	P48509	253 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	NR2C2	P49116	596 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	UBASH3A	P57075	661 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	CSNK1G2	P78368	415 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	OTUD4	Q01804	1114 aa	Known RBP	3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	ACSM2A	Q08AH3	577 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	PRKAA1	Q13131	559 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	RPA4	Q13156	261 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	TFDP2	Q14188	446 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	GRB7	Q14451	532 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	SLMAP	Q14BN4	828 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	SLC5A12	Q1EHB4	618 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	HYAL4	Q2M3T9	481 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	NKAIN1	Q4KMZ8	207 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	TFDP3	Q5H9I0	405 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	LYPLAL1	Q5VWZ2	237 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	TMEM268	Q5VZI3	342 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	ACSM2B	Q68CK6	577 aa		3.96	□□□□□ -1.78
VPS52-222	ENST00000495981	LCTL	Q6UWM7	567 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms