RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TUBGCP3Q96CW5 907 aa16.17■□□□□ 0.18
HDAC4-211ENST00000494800 ELP4Q96EB1 424 aa16.17■□□□□ 0.18
HDAC4-211ENST00000494800 PRPF18Q99633 342 aaKnown RBP16.17■□□□□ 0.18
HDAC4-211ENST00000494800 OSBPL11Q9BXB4 747 aa16.17■□□□□ 0.18
HDAC4-211ENST00000494800 BAIAP2L1Q9UHR4 511 aa16.17■□□□□ 0.18
HDAC4-211ENST00000494800 EIF3LQ9Y262 564 aaKnown RBP16.17■□□□□ 0.18
HDAC4-211ENST00000494800 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-211ENST00000494800 PRAMEF25A6NGN4 478 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 TTC36A6NLP5 189 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 UGT2B11O75310 529 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 LYPLA1O75608 230 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-211ENST00000494800 TRAPPC6AO75865 159 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 CELA3AP09093 270 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 RFPL3SP0C7P2 107 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 ARRB2P32121 409 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 GCKP35557 465 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 ADORA2A-AS1P86434 159 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 GXYLT1Q4G148 440 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 BICRALQ6AI39 1079 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 ANKRD26P1Q6NSI1 321 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 LARP4Q71RC2 724 aaKnown RBP eCLIP16.16■□□□□ 0.18
HDAC4-211ENST00000494800 HGDQ93099 445 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 SLC35A4Q96G79 324 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 ADOQ96SZ5 270 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 C3orf14Q9HBI5 128 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 Q9N2J8 555 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 CHST11Q9NPF2 352 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 ACSS1Q9NUB1 689 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-211ENST00000494800 ATAD3AQ9NVI7 634 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 C15orf41Q9Y2V0 281 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 RAP2CQ9Y3L5 183 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 LIPGQ9Y5X9 500 aa16.16■□□□□ 0.18
HDAC4-211ENST00000494800 UPK1AO00322 258 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 DHRS4L1P0CG22 281 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 SLC1A6P48664 564 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 PNLIPRP2P54317 469 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 PSMD4P55036 377 aaKnown RBP16.15■□□□□ 0.18
HDAC4-211ENST00000494800 STX3Q13277 289 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 PDE7AQ13946 482 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 DECR1Q16698 335 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 PRSS53Q2L4Q9 553 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 VPS26BQ4G0F5 336 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 CYP27C1Q4G0S4 372 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 C6orf136Q5SQH8 315 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 TIGD3Q6B0B8 471 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 ZNF585AQ6P3V2 769 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 ANGPTL8Q6UXH0 198 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 ACAD11Q709F0 780 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 NATD1Q8N6N6 113 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 ANKRD42Q8N9B4 389 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 CEP70Q8NHQ1 597 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 NEIL3Q8TAT5 605 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 CIDECQ96AQ7 238 aaPredicted RBP16.15■□□□□ 0.18
HDAC4-211ENST00000494800 ZBTB9Q96C00 473 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 GNRHR2Q96P88 292 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 DMRTA2Q96SC8 542 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 RUBCNLQ9H714 662 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 NKIRAS1Q9NYS0 192 aa16.15■□□□□ 0.18
HDAC4-211ENST00000494800 SPTAN1Q13813 2472 aaKnown RBP16.14■□□□□ 0.18
HDAC4-211ENST00000494800 C15orf38-AP3S2A0A0A6YYH1 394 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 GNB5O14775 395 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 SCAMP2O15127 329 aaKnown RBP16.14■□□□□ 0.17
HDAC4-211ENST00000494800 WDR1O75083 606 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 ICOSLGO75144 302 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 CLDN14O95500 239 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 HOXD4P09016 255 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-211ENST00000494800 GABRA1P14867 456 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 BGNP21810 368 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 ACVR2AP27037 513 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 COL8A1P27658 744 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 RPL14P50914 215 aaKnown RBP16.14■□□□□ 0.17
HDAC4-211ENST00000494800 PDCD2Q16342 344 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-211ENST00000494800 SMU1Q2TAY7 513 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 BEND6Q5SZJ8 279 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-211ENST00000494800 IL23RQ5VWK5 629 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 HIST2H2BCQ6DN03 193 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 NPSR1Q6W5P4 371 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 ZNF551Q7Z340 670 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-211ENST00000494800 SZRD1Q7Z422 152 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 ZNF781Q8N8C0 355 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 OR5M9Q8NGP3 310 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 CA5BP1Q8WTZ4 195 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 RND1Q92730 232 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 C3orf30Q96M34 536 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 NODALQ96S42 347 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 C1orf50Q9BV19 199 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 PNPLA3Q9NST1 481 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 NOP53Q9NZM5 478 aaKnown RBP16.14■□□□□ 0.17
HDAC4-211ENST00000494800 CBLCQ9ULV8 474 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 MAPRE3Q9UPY8 281 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 PCDHGB3Q9Y5G1 929 aa16.14■□□□□ 0.17
HDAC4-211ENST00000494800 UTP20O75691 2785 aaKnown RBP16.14■□□□□ 0.17
HDAC4-211ENST00000494800 SPTBN1Q01082 2364 aaKnown RBP16.13■□□□□ 0.17
HDAC4-211ENST00000494800 TMEM120BA0PK00 339 aa16.13■□□□□ 0.17
HDAC4-211ENST00000494800 FAM47E-STBD1D6RA91 191 aa16.13■□□□□ 0.17
HDAC4-211ENST00000494800 ADAM10O14672 748 aa16.13■□□□□ 0.17
HDAC4-211ENST00000494800 ITM2AO43736 263 aa16.13■□□□□ 0.17
HDAC4-211ENST00000494800 TSPAN2O60636 221 aa16.13■□□□□ 0.17
HDAC4-211ENST00000494800 NME6O75414 186 aaPredicted RBP16.13■□□□□ 0.17
HDAC4-211ENST00000494800 CBR3O75828 277 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms