RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 CLEC18BQ6UXF7 455 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 NPSR1Q6W5P4 371 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 LARP4Q71RC2 724 aaKnown RBP eCLIP14.63□□□□□ -0.075e-8■■■□□ 14.9
LIME1-209ENST00000494776 WDR53Q7Z5U6 358 aaPredicted RBP14.63□□□□□ -0.07
LIME1-209ENST00000494776 FJX1Q86VR8 437 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 SPPL2CQ8IUH8 684 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 LRRC34Q8IZ02 419 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 FAM109AQ8N4B1 249 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 CLEC18CQ8NCF0 446 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 NUP43Q8NFH3 380 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 PIWIL2Q8TC59 973 aaKnown RBP14.63□□□□□ -0.07
LIME1-209ENST00000494776 SSC4DQ8WTU2 575 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 ZNF597Q96LX8 424 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 RILPQ96NA2 401 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 COL21A1Q96P44 957 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 ADOQ96SZ5 270 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 DUSP26Q9BV47 211 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 LDAHQ9H6V9 325 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 Q9N2J8 555 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 ZFP64Q9NPA5 681 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 INTS9Q9NV88 658 aaKnown RBP14.63□□□□□ -0.07
LIME1-209ENST00000494776 KLRF1Q9NZS2 232 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 B4GALT7Q9UBV7 327 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 ERRFI1Q9UJM3 462 aaPredicted RBP14.63□□□□□ -0.07
LIME1-209ENST00000494776 MRTO4Q9UKD2 239 aaKnown RBP14.63□□□□□ -0.07
LIME1-209ENST00000494776 A0A1B0GTH9 108 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 OR6C70A6NIJ9 312 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 SDHDO14521 159 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 EMC8O43402 210 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 ABCB7O75027 752 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 UGT2B11O75310 529 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 SASH3O75995 380 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 GLSO94925 669 aaPredicted RBP14.62□□□□□ -0.07
LIME1-209ENST00000494776 EPHA3P29320 983 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 MRPS22P82650 360 aaKnown RBP14.62□□□□□ -0.07
LIME1-209ENST00000494776 PRR5P85299 388 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 PSG6Q00889 435 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 FOXO1Q12778 655 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 EFR3AQ14156 821 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 SLC10A1Q14973 349 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 MLC1Q15049 377 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 SPDYE7PQ495Y7 208 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 VPS26BQ4G0F5 336 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 CYP27C1Q4G0S4 372 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 DESI1Q6ICB0 168 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 SPATA19Q7Z5L4 167 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 RIMKLAQ8IXN7 391 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 TMEM251Q8N6I4 163 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 OR4N2Q8NGD1 307 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 NUDT8Q8WV74 236 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 OR5P2Q8WZ92 322 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 COQ8BQ96D53 544 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 ANGPTL4Q9BY76 406 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 BHLHE41Q9C0J9 482 aaPredicted RBP14.62□□□□□ -0.07
LIME1-209ENST00000494776 WDR55Q9H6Y2 383 aaPredicted RBP14.62□□□□□ -0.07
LIME1-209ENST00000494776 EXO5Q9H790 373 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 PROK2Q9HC23 129 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 CBLCQ9ULV8 474 aa14.62□□□□□ -0.07
LIME1-209ENST00000494776 TTC36A6NLP5 189 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 CCL21O00585 134 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 PRRG2O14669 202 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 ZNHIT1O43257 154 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 PSMG1O95456 288 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 C6orf47O95873 294 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 ESRRAP11474 423 aaPredicted RBP14.61□□□□□ -0.07
LIME1-209ENST00000494776 GDF1P27539 372 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 GABRA3P34903 492 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 PTGS2P35354 604 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 RFX3P48380 749 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 C21orf58P58505 322 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 GAB1Q13480 694 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 TOMM20Q15388 145 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 DECR1Q16698 335 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 HYAL4Q2M3T9 481 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 SLC30A6Q6NXT4 461 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 ARHGAP11AQ6P4F7 1023 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 GPR151Q8TDV0 419 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 SLC9A6Q92581 669 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 HGDQ93099 445 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 EFHD2Q96C19 240 aaPredicted RBP14.61□□□□□ -0.07
LIME1-209ENST00000494776 CHMP6Q96FZ7 201 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 MS4A4EQ96PG1 132 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 NODALQ96S42 347 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 LMF2Q9BU23 707 aaKnown RBP14.61□□□□□ -0.07
LIME1-209ENST00000494776 OSBPL11Q9BXB4 747 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 ZDHHC11Q9H8X9 412 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 ZCCHC3Q9NUD5 404 aaKnown RBP14.61□□□□□ -0.07
LIME1-209ENST00000494776 SUCOQ9UBS9 1254 aaKnown RBP14.61□□□□□ -0.07
LIME1-209ENST00000494776 PTPN13Q12923 2485 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 RELNP78509 3460 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 DOPEY2Q9Y3R5 2298 aa14.61□□□□□ -0.07
LIME1-209ENST00000494776 LRRK2Q5S007 2527 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 SVILO95425 2214 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 PRAMEF25A6NGN4 478 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 GNB5O14775 395 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 TSPAN2O60636 221 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 TRIM3O75382 744 aaPredicted RBP14.6□□□□□ -0.07
LIME1-209ENST00000494776 TRAPPC6AO75865 159 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 KCNH1O95259 989 aa14.6□□□□□ -0.07
LIME1-209ENST00000494776 CA7P43166 264 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms