RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 DCST1Q5T197 706 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 RIPPLY2Q5TAB7 128 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CES4AQ5XG92 561 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CLEC6AQ6EIG7 209 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 ARSKQ6UWY0 536 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 PLXDC2Q6UX71 529 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 SLC44A2Q8IWA5 706 aaPredicted RBP8.75□□□□□ -1.01
MSH5-218ENST00000494646 CLYBLQ8N0X4 340 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 WDSUB1Q8N9V3 476 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 NAXEQ8NCW5 288 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 OR7G2Q8NG99 324 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 ZNF675Q8TD23 568 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 NTNG2Q96CW9 530 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 TMCO6Q96DC7 493 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CCDC126Q96EE4 140 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 COL21A1Q96P44 957 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 OSBPL11Q9BXB4 747 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 FOLH1BQ9HBA9 442 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 SERHLQ9NQF3 203 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 OXSMQ9NWU1 459 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 SENP1Q9P0U3 644 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 EXO1Q9UQ84 846 aaKnown RBP8.75□□□□□ -1.01
MSH5-218ENST00000494646 STK38LQ9Y2H1 464 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 PCDHGB3Q9Y5G1 929 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 ZFHX3Q15911 3703 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 AKAP6Q13023 2319 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 HRNRQ86YZ3 2850 aaPredicted RBP8.75□□□□□ -1.01
MSH5-218ENST00000494646 HIVEP1P15822 2718 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 PRAMEF25A6NGN4 478 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 FRG2CA6NGY1 282 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 OR6C70A6NIJ9 312 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 HSPB2A8KAH6 182 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 C17orf51A8MQB3 221 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 MYO1GB0I1T2 1018 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 SNPHO15079 494 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 TO15178 435 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 TSPAN2O60636 221 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 CDH16O75309 829 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 SEC22BO75396 215 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 CBR3O75828 277 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 IL2RAP01589 272 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 DDCP20711 480 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 CEACAM8P31997 349 aaPredicted RBP8.74□□□□□ -1.01
MSH5-218ENST00000494646 KRT20P35900 424 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 NCBP2P52298 156 aaKnown RBP eCLIP8.74□□□□□ -1.01
MSH5-218ENST00000494646 DNAJB13P59910 316 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 HSPB2Q16082 182 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 ERCC6LQ2NKX8 1250 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 ACSF3Q4G176 576 aaPredicted RBP8.74□□□□□ -1.01
MSH5-218ENST00000494646 FAM71E1Q6IPT2 247 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 NOXRED1Q6NXP6 359 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 GALNT18Q6P9A2 607 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 TMEM107Q6UX40 140 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 NPSR1Q6W5P4 371 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 FRMD7Q6ZUT3 714 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 LARP4Q71RC2 724 aaKnown RBP eCLIP8.74□□□□□ -1.01
MSH5-218ENST00000494646 TMEM200AQ86VY9 491 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 TDRPQ86YL5 185 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 C10orf107Q8IVU9 208 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 TRIM42Q8IWZ5 723 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 ZZZ3Q8IYH5 903 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 PM20D2Q8IYS1 436 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 FAM9CQ8IZT9 166 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 OR2W6PQ8NHA6 318 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 OR14L1PQ8NHC6 308 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 NRGNQ92686 78 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 GFM2Q969S9 779 aaKnown RBP8.74□□□□□ -1.01
MSH5-218ENST00000494646 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 EFHD2Q96C19 240 aaPredicted RBP8.74□□□□□ -1.01
MSH5-218ENST00000494646 C11orf24Q96F05 449 aaPredicted RBP8.74□□□□□ -1.01
MSH5-218ENST00000494646 EGLN2Q96KS0 407 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 VSTM2LQ96N03 204 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 PRDM14Q9GZV8 571 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 GLIPR2Q9H4G4 154 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 MIEF1Q9NQG6 463 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 RRAGDQ9NQL2 400 aaPredicted RBP8.74□□□□□ -1.01
MSH5-218ENST00000494646 SIRT5Q9NXA8 310 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 OR10H1Q9Y4A9 318 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 PTGDR2Q9Y5Y4 395 aa8.74□□□□□ -1.01
MSH5-218ENST00000494646 FAM47E-STBD1D6RA91 191 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 SYT5O00445 386 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 PLOD3O60568 738 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 SPAG7O75391 227 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 ZWINTO95229 277 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 UROSP10746 265 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 TACR1P25103 407 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 IL12BP29460 328 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 TIMP3P35625 211 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 MC3RP41968 323 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 RFX3P48380 749 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 ZNF136P52737 540 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 PNLIPRP2P54317 469 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 SLC18A2Q05940 514 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 ZNF763Q0D2J5 394 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 ZNF155Q12901 538 aaPredicted RBP8.73□□□□□ -1.01
MSH5-218ENST00000494646 SNTA1Q13424 505 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 GAB1Q13480 694 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 EFR3AQ14156 821 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 CEBPEQ15744 281 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 SLC25A35Q3KQZ1 300 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms