RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TMEM81Q6P7N7 255 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 SLC44A2Q8IWA5 706 aaPredicted RBP30.36■■■□□ 2.45
CBX4-203ENST00000494546 OR1J4Q8NGS1 313 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 NTNG2Q96CW9 530 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 TMCO6Q96DC7 493 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 AMDHD1Q96NU7 426 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 TSSK3Q96PN8 268 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 ADOQ96SZ5 270 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 CCT7Q99832 543 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 TTYH2Q9BSA4 534 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 UBQLN3Q9H347 655 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 CENPEQ02224 2701 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 A0A087WV62 115 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 PRAMEF25A6NGN4 478 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 OR6C70A6NIJ9 312 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 PIP5K1BO14986 540 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 LSM1O15116 133 aaKnown RBP30.35■■■□□ 2.45
CBX4-203ENST00000494546 RGS16O15492 202 aaPredicted RBP30.35■■■□□ 2.45
CBX4-203ENST00000494546 AKAP10O43572 662 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 TYROBPO43914 113 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 SLITRK5O94991 958 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 HPNP05981 417 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 SDC1P18827 310 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 ELAVL4P26378 380 aaKnown RBP30.35■■■□□ 2.45
CBX4-203ENST00000494546 IL12BP29460 328 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 CHRNB4P30926 498 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 PTGDSP41222 190 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 UGT3A2Q3SY77 523 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 C1orf185Q5T7R7 199 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 HOMEZQ8IX15 550 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 FCRL1Q96LA6 429 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 DDX18Q9NVP1 670 aaKnown RBP30.35■■■□□ 2.45
CBX4-203ENST00000494546 C19orf53Q9UNZ5 99 aaPredicted RBP30.35■■■□□ 2.45
CBX4-203ENST00000494546 OR10H1Q9Y4A9 318 aa30.35■■■□□ 2.45
CBX4-203ENST00000494546 FAM90A27PA6NNH2 459 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 BPGMP07738 259 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 GLI4P10075 376 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 PTPN6P29350 595 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 SNTA1Q13424 505 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 CLHC1Q8NHS4 586 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 SLC35A4Q96G79 324 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 BAIAP2L1Q9UHR4 511 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 RAB21Q9UL25 225 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 SLC6A5Q9Y345 797 aa30.34■■■□□ 2.45
CBX4-203ENST00000494546 PLOD2O00469 737 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 SNPHO15079 494 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 ABCB7O75027 752 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 GABRA1P14867 456 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 SERPINB5P36952 375 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 KIR3DL1P43629 444 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 PSPHP78330 225 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 LARP4Q71RC2 724 aaKnown RBP eCLIP30.33■■■□□ 2.45
CBX4-203ENST00000494546 OR4N2Q8NGD1 307 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 PPCDCQ96CD2 204 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 REEP4Q9H6H4 257 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 MAPRE3Q9UPY8 281 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 TMED5Q9Y3A6 229 aa30.33■■■□□ 2.45
CBX4-203ENST00000494546 UPK1AO00322 258 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 PDPK1O15530 556 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 CTIFO43310 598 aaKnown RBP30.32■■■□□ 2.44
CBX4-203ENST00000494546 TSPAN2O60636 221 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 ARRB2P32121 409 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 HSPB3Q12988 150 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 EIPR1Q53HC9 387 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 ZNF551Q7Z340 670 aaPredicted RBP30.32■■■□□ 2.44
CBX4-203ENST00000494546 LILRB4Q8NHJ6 448 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 CIDECQ96AQ7 238 aaPredicted RBP30.32■■■□□ 2.44
CBX4-203ENST00000494546 ZBTB9Q96C00 473 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 EFHD2Q96C19 240 aaPredicted RBP30.32■■■□□ 2.44
CBX4-203ENST00000494546 ELP4Q96EB1 424 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 UCK2Q9BZX2 261 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 CENPHQ9H3R5 247 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 SERHLQ9NQF3 203 aa30.32■■■□□ 2.44
CBX4-203ENST00000494546 HOXD4P09016 255 aaPredicted RBP30.31■■■□□ 2.44
CBX4-203ENST00000494546 PTGER4P35408 488 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 ETV4P43268 484 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 PSG6Q00889 435 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 EFR3AQ14156 821 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 WIPI1Q5MNZ9 446 aaPredicted RBP30.31■■■□□ 2.44
CBX4-203ENST00000494546 ULK2Q8IYT8 1036 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 OR2L13Q8N349 312 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 PKNOX2Q96KN3 472 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 SH3BP4Q9P0V3 963 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 CACNA1CQ13936 2221 aa30.31■■■□□ 2.44
CBX4-203ENST00000494546 NKX2-6A6NCS4 301 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 PNLIPRP2P54317 469 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 CRYZQ08257 329 aaKnown RBP30.3■■■□□ 2.44
CBX4-203ENST00000494546 ZNF385BQ569K4 471 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 WDR53Q7Z5U6 358 aaPredicted RBP30.3■■■□□ 2.44
CBX4-203ENST00000494546 YRDCQ86U90 279 aaKnown RBP30.3■■■□□ 2.44
CBX4-203ENST00000494546 NUDCD3Q8IVD9 361 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 PPP1R14CQ8TAE6 165 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 TIMP4Q99727 224 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 GIMAP2Q9UG22 337 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 ZDHHC2Q9UIJ5 367 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 PCDHGB3Q9Y5G1 929 aa30.3■■■□□ 2.44
CBX4-203ENST00000494546 PHF3Q92576 2039 aaKnown RBP30.3■■■□□ 2.44
CBX4-203ENST00000494546 WDR91A4D1P6 747 aa30.29■■■□□ 2.44
CBX4-203ENST00000494546 GPC1P35052 558 aa30.29■■■□□ 2.44
CBX4-203ENST00000494546 SERPINB4P48594 390 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms