RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SDHDO14521 159 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 SCAMP2O15127 329 aaKnown RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 TO15178 435 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 PDPK1O15530 556 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 AKAP10O43572 662 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 BCAS2O75934 225 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 GLSO94925 669 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 SLITRK5O94991 958 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 LRATO95237 230 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 CT45A8P0DMV1 189 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 CT45A9P0DMV2 189 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 PRPS2P11908 318 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 CNR1P21554 472 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ABCD3P28288 659 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 NTSP30990 170 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 MC3RP41968 323 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 PPICP45877 212 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 NCBP2P52298 156 aaKnown RBP eCLIP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 GPR85P60893 370 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 EMX2Q04743 252 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 PTGR1Q14914 329 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 CT45A2Q5DJT8 189 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 IL23RQ5VWK5 629 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 OGFOD2Q6N063 350 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ANKRD26P1Q6NSI1 321 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 TMEM81Q6P7N7 255 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 NPSR1Q6W5P4 371 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 TMEM64Q6YI46 380 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 LARP4Q71RC2 724 aaKnown RBP eCLIP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ZNF551Q7Z340 670 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 MAVSQ7Z434 540 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 CAMKMTQ7Z624 323 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 TRIM42Q8IWZ5 723 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 DND1Q8IYX4 353 aaKnown RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 FNDC5Q8NAU1 212 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 POGLUT1Q8NBL1 392 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 FAM98AQ8NCA5 519 aaKnown RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 OR7A2PQ8NGA2 310 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ZNF75CPQ92670 426 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 HOXB13Q92826 284 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 HGDQ93099 445 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 CIDECQ96AQ7 238 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ZNF775Q96BV0 537 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 TUBGCP3Q96CW5 907 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ELP4Q96EB1 424 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 EAF1Q96JC9 268 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 C1orf50Q9BV19 199 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 NUF2Q9BZD4 464 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 MANSC1Q9H8J5 431 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 AKTIPQ9H8T0 292 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 FOLH1BQ9HBA9 442 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 PFDN4Q9NQP4 134 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 SIRT3Q9NTG7 399 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ACSS1Q9NUB1 689 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ZNF446Q9NWS9 450 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 NTMQ9P121 344 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 BCAP29Q9UHQ4 241 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 C19orf53Q9UNZ5 99 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ERVK-11Q9UQG0 969 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 CFL2Q9Y281 166 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 GPR55Q9Y2T6 319 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-217ENST00000494395 ZNF407Q9C0G0 2248 aa8.06□□□□□ -1.12
ITGB1-217ENST00000494395 FREM3P0C091 2139 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 DNAJC13O75165 2243 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 LRRC3CA6NJW4 275 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 HMGB1P1B2RPK0 211 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 KLRC4-KLRK1H3BQV0 150 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ZNF195O14628 629 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ANKRD28O15084 1053 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ACOX3O15254 700 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 NME6O75414 186 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ABCB1P08183 1280 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 STSP08842 583 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ALDOCP09972 364 aaKnown RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 G6PDP11413 515 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 NID1P14543 1247 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 DRD5P21918 477 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 RFC3P40938 356 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 MAP3K8P41279 467 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 DIO3P55073 304 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 CLDN8P56748 225 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 FBXW4P57775 412 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 KCNK10P57789 538 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 DCAF7P61962 342 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 PSG6Q00889 435 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ALDH6A1Q02252 535 aaKnown RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 MAD2L1Q13257 205 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 MLC1Q15049 377 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 RPS6KA2Q15349 733 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 NNATQ16517 81 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 HYAL4Q2M3T9 481 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 EIF2S3LQ2VIR3 472 aaKnown RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 CMPK2Q5EBM0 449 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 EXOSC6Q5RKV6 272 aaKnown RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 HLA-DQA1Q5Y7H0 255 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 SLC22A10Q63ZE4 541 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ATG16L1Q676U5 607 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 TMEM107Q6UX40 140 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 FGD2Q7Z6J4 655 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 WDR75Q8IWA0 830 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms